KEGG   Glarea lozoyensis: GLAREA_06782
Entry
GLAREA_06782      CDS       T04883                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K10752  histone-binding protein RBBP4
Organism
glz  Glarea lozoyensis
Pathway
glz03082  ATP-dependent chromatin remodeling
glz03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:glz00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    GLAREA_06782
   03083 Polycomb repressive complex
    GLAREA_06782
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:glz03036]
    GLAREA_06782
Chromosome and associated proteins [BR:glz03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     GLAREA_06782
  Histone modification proteins
   HAT complexes
    HATB complex
     GLAREA_06782
   HDAC complexes
    Sin3A-HDAC complex
     GLAREA_06782
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     GLAREA_06782
    PRC2.2
     GLAREA_06782
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     GLAREA_06782
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    GLAREA_06782
  Chromatin remodeling factors
   NuRD complex
    GLAREA_06782
   NuRF complex
    GLAREA_06782
   NuRF complex (fruit fly)
    GLAREA_06782
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st EIF3I WD_LRWD1 Beta-prop_EML WD40_RFWD3 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_SCAP MIOS_WD40 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 19465835
NCBI-ProteinID: XP_008078921
UniProt: S3D9J0
LinkDB
Position
Unknown
AA seq 440 aa
MAPEPVDIDMEVNRTEIDEGDAEQKIINEEYKTWKKNSPFLYDMILSTALEWPTLTTQWF
PDVKEPAGKNFTIHRLLIGTHTSNGAQNYLQIANVELPKNITPNPHDYDEERGEIGGYGN
SASGEQPAIKMNIEQKIDHPGEVNKARYQPQNPNIIATMCVDGRVLIFDRTKHSSIPKGV
VNPQAELIGHKKEGFGLSWNPDPAQAGKLATGGEDRTVRLWDLKTISSSNNHIKASRVYT
HHTAVVNDVQYHPTHRSLIGSVSDDLTLQILDVRQASNSKSAQQGENGHLDVINALAFNP
ASEFILATASGDKTIGIWDMRNLKDKLHALEGHTEAVTSLAWHPHEEAVLGSASYDRRVI
FWDLSRVGEEQLPDDQEDGPPELLFMHGGHTNHMADFSWNLNEPWVVCSAAEDNMIQIWK
VAEAIVGKDLDDVPMDELER
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggcacctgaacctgtagacatcgacatggaagtcaaccgcaccgagatcgatgaagga
gatgctgaacaaaagattatcaatgaagaatataaaacgtggaaaaagaatagccctttc
ctctatgatatgatcttgagcactgcgctcgaatggcctactttgacaacccagtggttt
ccggacgtcaaagagccggctggtaagaacttcacaatccaccgacttctcattggtaca
catacctcgaatggcgctcaaaactatctccaaatcgcaaatgtcgagttaccaaagaac
atcactcccaatccccacgactatgatgaagagaggggagaaattggtggttatgggaat
tcagcgtctggggagcagccagctataaaaatgaacattgagcaaaagattgatcacccc
ggagaagtcaacaaggccagataccagccacaaaatcccaacataattgctacaatgtgt
gtggatggccgagtacttatttttgatcgcacaaagcatagcagtattccaaaaggtgtt
gtcaacccccaagcggagctcattgggcataagaaggaagggtttggtctcagttggaac
ccggatccagcccaagctgggaagcttgccactggaggggaagatcgtacagtacgcttg
tgggacctgaaaacaatctcctcgtcaaacaaccacatcaaagcttcgcgtgtttacaca
catcacaccgccgtggttaacgacgttcaataccatccaacgcacagatcacttatcgga
tctgtatccgatgatctcactctccagatattagatgtcaggcaggcgtcgaatagtaag
tctgcccagcagggcgagaatggccacttggacgtcataaatgcactagcattcaaccct
gcctcggaatttattctggcaactgcatcaggcgacaagaccattggtatctgggatatg
agaaacctcaaagacaaactgcatgctttggaaggtcatacagaagccgtgacttcactt
gcatggcatccacacgaagaggctgtcctgggaagtgctagttatgatcgtagggttatt
ttctgggatctcagccgcgtaggcgaggagcagctacccgatgatcaagaagacgggcca
cctgagttgctattcatgcatggcggacacacaaatcacatggctgattttagctggaat
cttaacgagccctgggtggtttgtagcgctgctgaagacaacatgatacaaatctggaag
gtggctgaagcgatagtgggcaaggatcttgatgatgttccgatggacgagttagagaga
tga

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