KEGG   Glarea lozoyensis: GLAREA_06890
Entry
GLAREA_06890      CDS       T04883                                 
Name
(RefSeq) Sm-like ribonucleoprotein
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
glz  Glarea lozoyensis
Pathway
glz03018  RNA degradation
glz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:glz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GLAREA_06890
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GLAREA_06890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:glz03019]
    GLAREA_06890
   03041 Spliceosome [BR:glz03041]
    GLAREA_06890
Messenger RNA biogenesis [BR:glz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     GLAREA_06890
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     GLAREA_06890
Spliceosome [BR:glz03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    GLAREA_06890
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 19465943
NCBI-ProteinID: XP_008079029
UniProt: S3D5Z7
LinkDB
Position
Unknown
AA seq 126 aa
MLPLGLLTAAQGHPMLVELKNGETLNGHLVTCDTWMNLTLKEVVQTSPDGDKFYRLPEVY
VKGNNIKYLRVPDEIIDLVKEQQQGQQNSGYRGGRGGQRGDYGGRGGDRGRGGRGGGRGR
GRGRGS
NT seq 381 nt   +upstreamnt  +downstreamnt
atgcttcctctcggcctccttacagcggcgcagggccacccaatgctggtagagctcaaa
aatggcgagacgctcaatggccatttggtcacttgtgatacatggatgaatcttacgtta
aaggaagttgtccagacaagcccggacggcgacaaattctacagattaccggaagtatac
gtaaaagggaacaacatcaaatatctgagggtacctgacgagattattgatttagtcaag
gagcaacagcaaggacagcagaacagtggataccgaggaggccgaggagggcagagagga
gactatggtggtagaggtggagacagaggacgaggtgggagaggtggaggccggggaagg
ggcagaggaagaggttcttga

DBGET integrated database retrieval system