Glarea lozoyensis: GLAREA_06890
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Entry
GLAREA_06890 CDS
T04883
Name
(RefSeq) Sm-like ribonucleoprotein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
glz
Glarea lozoyensis
Pathway
glz03018
RNA degradation
glz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLAREA_06890
09123 Folding, sorting and degradation
03018 RNA degradation
GLAREA_06890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_06890
03041 Spliceosome [BR:
glz03041
]
GLAREA_06890
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
GLAREA_06890
mRNA degradation factors
5'-3' decay
Lsm complex
GLAREA_06890
Spliceosome [BR:
glz03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
GLAREA_06890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
19465943
NCBI-ProteinID:
XP_008079029
UniProt:
S3D5Z7
LinkDB
All DBs
Position
Unknown
AA seq
126 aa
AA seq
DB search
MLPLGLLTAAQGHPMLVELKNGETLNGHLVTCDTWMNLTLKEVVQTSPDGDKFYRLPEVY
VKGNNIKYLRVPDEIIDLVKEQQQGQQNSGYRGGRGGQRGDYGGRGGDRGRGGRGGGRGR
GRGRGS
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctctcggcctccttacagcggcgcagggccacccaatgctggtagagctcaaa
aatggcgagacgctcaatggccatttggtcacttgtgatacatggatgaatcttacgtta
aaggaagttgtccagacaagcccggacggcgacaaattctacagattaccggaagtatac
gtaaaagggaacaacatcaaatatctgagggtacctgacgagattattgatttagtcaag
gagcaacagcaaggacagcagaacagtggataccgaggaggccgaggagggcagagagga
gactatggtggtagaggtggagacagaggacgaggtgggagaggtggaggccggggaagg
ggcagaggaagaggttcttga
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