KEGG   Glarea lozoyensis: GLAREA_07194
Entry
GLAREA_07194      CDS       T04883                                 
Name
(RefSeq) Nucleic acid-binding protein
  KO
K03679  exosome complex component RRP4
Organism
glz  Glarea lozoyensis
Pathway
glz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:glz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GLAREA_07194
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:glz03019]
    GLAREA_07194
Messenger RNA biogenesis [BR:glz03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     GLAREA_07194
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     GLAREA_07194
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 RRP40_S1 ECR1_N_2
Other DBs
NCBI-GeneID: 19466247
NCBI-ProteinID: XP_008079333
UniProt: S3DQ42
LinkDB
Position
Unknown
AA seq 339 aa
MAITIHAPAPAVLPYKTADSSDEDSDDGGADLQGDINMRPSKRARHYREDIVTPGEVVTD
EDQWMRGHGTYHNHAREIIATVAGTVQKTNKLLSVRPLRARYTPEIGDLVVGRIVEVQSK
KWRVDVGAPVLASLPLSAINLPGGILRKRTETDELQIRTFFSEGDLLVAEVQSLYQDGSA
SLHTRSLKYGKLRNGVFMSISGTGGGGGVVRARRQLWTIDTMNGGGKVDVILGVNGYVWI
NKHIEVAGGETAITRMEESVSATVYSSQNDSIAPETRKEIARIRGVITLLVEEGLRVDED
MVMKGYEAALLVDSEEDGETNVFLGGEQGKLVLKQLSGV
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggcaatcaccatccacgcaccagctccggctgttctaccctataagaccgcagactca
tccgacgaagactctgacgatggtggagccgacctccagggcgacattaacatgcgcccc
agcaaacgagcccgacattatcgagaagacattgtcacgccgggcgaggttgtcacggat
gaggatcaatggatgagaggccacggcacataccacaaccacgcgcgcgaaatcatcgca
accgtcgccggcaccgtccaaaaaaccaacaaactcctctccgtccgccccctccgtgca
cgctacacccccgagattggcgatctagtcgtcggtcgcatcgtcgaggtgcaatccaag
aaatggcgtgtcgacgttggcgcgcctgtgttggccagtctgccattatcggcgatcaat
ttacctggtggcattctacgcaaacgcacggagacggatgagttgcagattcgtacgttt
ttcagcgagggcgatttgctggttgctgaggtgcagagtttatatcaggatgggagtgcg
agtttgcatacgaggagtttgaagtatgggaagttgcggaatggggttttcatgagtatt
agtgggacggggggaggtgggggcgtggtgagggcgaggagacagctgtggacgattgat
acgatgaatgggggtgggaaggtggatgtgattttgggggttaatgggtatgtctggatt
aacaaacatattgaggttgcggggggggagacggcgattacgaggatggaggagagtgtt
agtgcgacggtttatagtagtcagaatgattcgattgcgccagagacgagaaaggagatt
gctaggataagaggggtgattactttgttggttgaggagggattgagagttgatgaggat
atggttatgaagggatatgaagctgcgttgttggttgatagtgaggaagatggggagacg
aatgttttccttggaggagaacagggaaaactcgtgttgaagcagttgagcggtgtatga

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