Glarea lozoyensis: GLAREA_07194
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Entry
GLAREA_07194 CDS
T04883
Name
(RefSeq) Nucleic acid-binding protein
KO
K03679
exosome complex component RRP4
Organism
glz
Glarea lozoyensis
Pathway
glz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLAREA_07194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_07194
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
GLAREA_07194
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
GLAREA_07194
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
RRP40_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
19466247
NCBI-ProteinID:
XP_008079333
UniProt:
S3DQ42
LinkDB
All DBs
Position
Unknown
AA seq
339 aa
AA seq
DB search
MAITIHAPAPAVLPYKTADSSDEDSDDGGADLQGDINMRPSKRARHYREDIVTPGEVVTD
EDQWMRGHGTYHNHAREIIATVAGTVQKTNKLLSVRPLRARYTPEIGDLVVGRIVEVQSK
KWRVDVGAPVLASLPLSAINLPGGILRKRTETDELQIRTFFSEGDLLVAEVQSLYQDGSA
SLHTRSLKYGKLRNGVFMSISGTGGGGGVVRARRQLWTIDTMNGGGKVDVILGVNGYVWI
NKHIEVAGGETAITRMEESVSATVYSSQNDSIAPETRKEIARIRGVITLLVEEGLRVDED
MVMKGYEAALLVDSEEDGETNVFLGGEQGKLVLKQLSGV
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcaccatccacgcaccagctccggctgttctaccctataagaccgcagactca
tccgacgaagactctgacgatggtggagccgacctccagggcgacattaacatgcgcccc
agcaaacgagcccgacattatcgagaagacattgtcacgccgggcgaggttgtcacggat
gaggatcaatggatgagaggccacggcacataccacaaccacgcgcgcgaaatcatcgca
accgtcgccggcaccgtccaaaaaaccaacaaactcctctccgtccgccccctccgtgca
cgctacacccccgagattggcgatctagtcgtcggtcgcatcgtcgaggtgcaatccaag
aaatggcgtgtcgacgttggcgcgcctgtgttggccagtctgccattatcggcgatcaat
ttacctggtggcattctacgcaaacgcacggagacggatgagttgcagattcgtacgttt
ttcagcgagggcgatttgctggttgctgaggtgcagagtttatatcaggatgggagtgcg
agtttgcatacgaggagtttgaagtatgggaagttgcggaatggggttttcatgagtatt
agtgggacggggggaggtgggggcgtggtgagggcgaggagacagctgtggacgattgat
acgatgaatgggggtgggaaggtggatgtgattttgggggttaatgggtatgtctggatt
aacaaacatattgaggttgcggggggggagacggcgattacgaggatggaggagagtgtt
agtgcgacggtttatagtagtcagaatgattcgattgcgccagagacgagaaaggagatt
gctaggataagaggggtgattactttgttggttgaggagggattgagagttgatgaggat
atggttatgaagggatatgaagctgcgttgttggttgatagtgaggaagatggggagacg
aatgttttccttggaggagaacagggaaaactcgtgttgaagcagttgagcggtgtatga
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