Glarea lozoyensis: GLAREA_07369
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Entry
GLAREA_07369 CDS
T04883
Name
(RefSeq) PH
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
glz
Glarea lozoyensis
Pathway
glz03022
Basal transcription factors
glz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GLAREA_07369
09124 Replication and repair
03420 Nucleotide excision repair
GLAREA_07369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
glz03021
]
GLAREA_07369
03400 DNA repair and recombination proteins [BR:
glz03400
]
GLAREA_07369
Transcription machinery [BR:
glz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GLAREA_07369
DNA repair and recombination proteins [BR:
glz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GLAREA_07369
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
19466422
NCBI-ProteinID:
XP_008080248
UniProt:
S3DJM6
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MSHLPKGSAIYKKKEGTLSITPNKSLLQWLPRDGGNTVAIAIGDITNLQQTPETAPKVML
KVFEKSPGAAEATTHLFQFNSPANPRGEANAIKDALTAVINAIKMADSNTPKANGSTPVS
AAMAMASAVTSKHGSVSAKWYDDSALKVDIELQQSLMKKDPALHRTYMEALRTKPDTISN
SQFNSQFWSTRTNILRAHAVESNQKRGSYNVLSAVKPRQVDGELKMNITHEQVQLIFSQH
PLVKRVYDENVPKLNEMDFWSRFFLSRLFKKLKGERIVTTDSTDPTFDRYLDAANNNGPD
AKLLGLHIPHFIDLEGNEENQGGNKGGNRADFTMRPGGIDKVPIVRTLNSLSEKIMAHVA
PSDIDPANPIGMDEETFNTLALRDLQGDSAENRIILNIKEQSQFFANEKTEVSADAALYS
KQVPAEVLSGMRSDVDPRAMGQRDGRGLDLSSAIGVIEDSDPEDEPETKTPHVGSKLSMK
NATQQIMEGVKARRLETDGFDAQSSLSGLSQRMFERITLTHATTTEFLHHFWLVFLSGDP
DRAGELAKMVETLERAMDRINAVANEAEAEREELISKKRKHIRDVFEKTGKKLKFNPTSV
EGGKKTVIEMMEPTIRTLQKATAEYKRALQAEGVEVS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatcttccaaaaggctcggccatctataagaaaaaggaaggaactttgagcatt
acacccaacaagtctcttttgcaatggctgcctcgagatggaggaaacacggtcgcaatc
gcaattggagatatcactaatcttcagcagaccccggagactgccccgaaagtcatgttg
aaagtgtttgaaaaatcacctggtgctgccgaggcaacaactcatttatttcaattcaac
tcgccagctaacccgcgaggagaagcaaatgctatcaaagatgctttgaccgcggtgata
aatgccattaagatggctgattccaacacaccaaaagcgaatggcagcactcctgtatct
gcagcgatggccatggcaagcgctgttacttcaaagcatggctcggtgtccgccaaatgg
tatgatgacagtgcattgaaggttgacattgaactccagcagtcactcatgaagaaagac
ccggcactgcatcgtacgtatatggaggctttgcggacaaagccggataccatatcaaat
tctcagttcaactcacaattctggtctacccgaacgaatattctcagagctcatgcggtc
gaatctaatcaaaagcgaggttcttacaacgtcctttcggctgtgaaaccgcggcaagtc
gatggggaactcaaaatgaacatcacccacgagcaggttcagcttattttcagccagcat
ccactggtcaagcgagtctatgatgagaatgttcccaagctcaacgagatggacttttgg
tcgaggttctttcttagccggcttttcaagaagttgaaaggagaaaggatagtaacaaca
gattcaactgaccctacgttcgatcgatatctagatgcagcaaataacaacggtcccgat
gcgaaacttcttggcttacacatcccacactttattgatctcgaaggcaatgaagaaaat
cagggtggtaataaggggggtaaccgagcagatttcactatgagacccggtggcatagac
aaagtgcccatcgtacgaacactcaacagtcttagcgaaaagatcatggcacacgtcgct
ccatcggacatcgatccagccaatcctatcgggatggacgaagaaaccttcaatactctg
gccctgcgcgatttgcaaggagattccgcggagaatcgtatcatactcaatatcaaagag
caaagccaattctttgcgaacgagaaaaccgaagtttccgctgatgcagcgctgtattct
aaacaagtacccgctgaagtcttgtcaggaatgcgttcagacgtagacccccgagcaatg
ggtcaaagagatgggagagggctagaccttagctctgctataggagtgattgaagacagc
gatccggaagacgaacctgagaccaaaactccccatgttggaagtaagctcagcatgaaa
aatgccactcaacaaatcatggaaggagtcaaagctcgtcgattggagacggatggattt
gacgcacaatcatctctttctggtctatctcagagaatgtttgaaagaatcacattgact
cacgcgacgacgacggaatttctgcatcacttctggcttgtatttctctcgggtgacccg
gaccgtgccggagaactagccaaaatggtcgagacattagaacgcgctatggatcgaata
aatgctgtggctaatgaagctgaggctgaaagagaagagctcattagtaaaaagcgaaaa
catatcagagatgtttttgaaaagactgggaagaagctcaagttcaatccaacttcggtg
gaaggcggaaagaagactgtaatagagatgatggagccaaccattagaacattgcaaaag
gccactgcggagtataaacgggctttgcaggcagaaggtgtagaggtatcatga
DBGET
integrated database retrieval system
