KEGG   Glarea lozoyensis: GLAREA_07568
Entry
GLAREA_07568      CDS       T04883                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
glz  Glarea lozoyensis
Pathway
glz03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:glz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    GLAREA_07568
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:glz03021]
    GLAREA_07568
   03036 Chromosome and associated proteins [BR:glz03036]
    GLAREA_07568
Transcription machinery [BR:glz03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     GLAREA_07568
   Coactivators
    SAGA/TFTC/STAGA complex
     GLAREA_07568
Chromosome and associated proteins [BR:glz03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     GLAREA_07568
    STAGA complex
     GLAREA_07568
    TFTC complex
     GLAREA_07568
    SAGA complex
     GLAREA_07568
    SLIK complex
     GLAREA_07568
SSDB
Motif
Pfam: WD40 TFIID_NTD2 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N NBCH_WD40 Beta-prop_SPT8 eIF2A LisH WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_Vps41 VPS8_N PALB2_WD40
Other DBs
NCBI-GeneID: 19466621
NCBI-ProteinID: XP_008080447
UniProt: S3D3R8
LinkDB
Position
Unknown
AA seq 708 aa
MRPHNGPASMAPSNQSLPNLDPQVIEYLVKKGYNRTEQMLRQESSNLDKDGKPIPERVED
LGTQKYTKAFQLLSNWVDSNLDIYKFELKKLLWPVFIYSFLDMITYGFTIDAEAFLHDFG
PRFEKFHHEDLQLLETLKLKSHIDENPTAKLYRSQKYKVPLNNNVYQALITFLEANSKTG
GTVLLNILVAYLEIKTTERGNLDQYSFEAIVSRSEDTANDEADQEGIPGTFIGVTNKDII
NNAAVLKLGFTPMDPDLAADLRAELEDEDIRNPPKPGVPTLIEEHERRIKREESVEGPKA
SEIPYPPSRARDLKMEILKIKESRDRFTIDTRTGGIGAGISICMWTFHNTLDTVTCIEFS
GDNNLVAVGTEESYIRLWTMDGSILESTIPSANSATPTNSRRLIGHAGPVYSLSFSPGIA
SAPGDISGPSTTSKLLLSSSSDKTVRLWSLETFTCLVVYKGHEGPVWNVKWGPFGHYFAT
CGWDRTVRVWAQDHISFLRMMVGHDTSVNQVAWHPNGAYVFSASDTSDKTVRMWSFVTGE
CVRVFTGHTEFISALECSPDGKILASADGSGCIILWDLAKGTQIKRCRGHAKGGVWSLSF
SVDSDCLISGGADGTVRIWEVKVPDDPYKDGGGEIVGTGGQADATRINGGPATGSQTNTT
SGAGGKKKGKETMITADQISAYPTKKSPVYKVKFTQMNCGIAGGVYLP
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgcggcctcataatggccctgcgtccatggcaccctcaaatcaatcattgcctaacctt
gatcctcaggtcatcgaatatcttgtcaagaaaggctacaaccgaactgagcagatgctt
cgacaagaatcgtcaaatttagacaaggatgggaagcctattcctgagcgagttgaggat
ctaggaacgcagaagtacacaaaagcctttcaacttcttagcaattgggtagattcgaat
ctcgacatttacaagtttgagctcaagaaactcctgtggccggtgttcatctactctttc
ctggacatgataacctacggattcacaatagatgccgaagcctttttgcatgatttcgga
cctcgatttgaaaagttccaccacgaggatcttcaacttctggaaactctcaaattaaaa
tcacacattgacgaaaaccctacagcgaagttatatcgctcgcagaagtataaagtgcct
ctcaacaataacgtgtatcaagccctcataacgtttcttgaagccaacagcaaaaccggt
ggaacggtgcttctaaatatcctcgtcgcctaccttgaaattaagacaaccgagcgtggc
aatctagatcagtatagtttcgaggctattgtaagccgatctgaagatacagccaacgat
gaagccgatcaagaaggcattccaggcacctttatcggagtaacaaataaagatatcatc
aacaatgcggctgtcctcaaattagggttcacgccaatggaccccgatctcgctgctgat
ctccgggccgaacttgaggatgaggatattcgaaatcccccaaagcccggggtaccaaca
ttaatcgaggaacatgaacggcgaattaaacgcgaagaaagcgttgaagggccgaaggcc
agcgagataccatatccgccatcccgtgcgagagatctcaaaatggagattttgaagatc
aaggaatctagggaccgattcacgattgacacgcgtacaggaggtatcggtgctggcata
tcgatatgtatgtggacattccacaacacactggacactgtcacatgcatagagttttcg
ggcgataacaatctcgtggctgtcggaacggaagagtcctatatacggctatggacgatg
gacggtagtattcttgaatcaactatcccatcagcaaacagcgcgacaccaacaaactct
cggcgactcattggtcacgcgggtcctgtttacagtctttcattctctccgggtatcgcg
agtgcgcccggtgatatatcaggcccatccaccacgtcgaaactactcctctcttcctcc
tcggacaaaacggtgcgtctatggtcgttggaaactttcacttgtctggtcgtctacaaa
ggccatgaaggaccagtttggaacgtgaaatggggaccttttggacactactttgcgacc
tgcggttgggacaggactgttcgtgtttgggcgcaagatcatatctcattccttcgaatg
atggtgggtcacgatacgagcgtgaaccaagttgcatggcatcccaacggcgcatacgtc
ttctcagcaagcgacacctctgacaaaaccgtccgtatgtggtcctttgtaaccggcgaa
tgtgtacgagtctttactggccacacagaatttatttcagctctcgaatgtagtcctgat
ggaaagattcttgcttcagctgatggatccggatgcatcattctttgggatctagcaaaa
ggtacacagatcaagcgctgccgtggtcacgcaaagggtggagtatggtcactgtccttc
agtgttgattctgactgcttgatatctggtggagcagatggaacagtccggatctgggag
gttaaggttcctgatgatccttacaaagatggaggtggtgaaattgttggaactgggggt
caggccgatgccactcgtatcaatggtggcccagctactggatctcagacgaatacaact
tctggtgcgggaggaaagaaaaagggaaaagagacgatgatcacagcggatcagatcagc
gcctacccaacaaagaagtcgccagtatacaaggtcaagttcacgcagatgaactgtggt
atcgctggaggggtctatttaccataa

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