Glarea lozoyensis: GLAREA_08047
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Entry
GLAREA_08047 CDS
T04883
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
glz
Glarea lozoyensis
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_08047
03041 Spliceosome [BR:
glz03041
]
GLAREA_08047
03036 Chromosome and associated proteins [BR:
glz03036
]
GLAREA_08047
Enzymes [BR:
glz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GLAREA_08047
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
GLAREA_08047
mRNA cycle factors
Common to processing body (P body) and stress granule
GLAREA_08047
Spliceosome [BR:
glz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
GLAREA_08047
Chromosome and associated proteins [BR:
glz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
GLAREA_08047
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
19467098
NCBI-ProteinID:
XP_008088285
UniProt:
S3CCB2
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MSAWATEDLANALPAANEATSTAPTRTPQEHGWAEKQNYNYAVYNKSNKEIADQRAASKQ
TALGGDTDHVAIRESASELPDSQLAGDAVGGLQPGDWSSNAAVYEWQEEFGDVGPRFPEL
EQQLFGSEFHVKMGLDFKNIAEISVYQEGVVRIQPVLSFAEAGLHPVMLDNIKLAGYRVP
TPIQAYTMPAVHQGYDLVACAQTGSGKTAAFLIPILSKLMGKAKKLAAPRPNPATFIPGV
SQAVRAEPLLLIVCPTRELATQIFDETRRFCYRTMLRPCCIYGGSPIPEQLNQLAKGCDV
LIATPGRLCDFIDRPHILSLNRLRYMVIDEADEMVGADWDQELKKIMSGGDQNTSQIKYL
MFSATFNKAARDLANHHLAMDHCKIRVGRAGSTHKNIKQDIVWVESSQKKKALIDLLMSL
PPARTMIFVNSKRGCDEVDDYLFNLNMPCTSIHSDRTQREREDSIRSFRTARCPILIATP
VAARGLDIANVVHVINYDLPSNSHGGIEEYMHRIGRTGRIGNHGLATSFYNERDSDLGEM
LVKTLLETNQEIPDFLTDLIPEGFVPGQGDVSTLKFEMDSDDEAEAGGDTSADAAGGGAW
GATTGATGGGDAWGANTGATGGDAWGATSGGGWGA
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcctgggccaccgaagacctggcaaatgccctaccggctgccaacgaagccact
tccactgctcccacgcgtaccccacaagagcatggttgggctgaaaagcaaaactacaat
tatgctgtgtacaacaaatccaacaaggagattgctgatcagcgtgccgcctcaaagcag
actgcccttggaggtgacactgaccacgtcgccatcagagagtcagcttctgagcttcct
gattctcaacttgctggcgatgccgttggaggccttcaacccggcgattggtcttccaat
gctgccgtctacgagtggcaagaagagttcggtgacgtcggtccacgcttcccagagctg
gagcaacaactcttcggctcagaattccatgtaaaaatgggactggactttaaaaatatc
gctgaaatcagcgtctaccaggagggtgtagtacgtatccagcctgttctgagcttcgca
gaggcaggacttcatcctgtcatgctcgataatatcaagctcgccggttacagagtccca
acccccatccaagcctacaccatgccagctgttcaccagggttacgacctcgttgcctgt
gcccagactggttctggaaagactgctgctttcttgatcccaatcttgtctaagctgatg
ggtaaggcaaagaagctggccgctcctcgccctaacccggcaacctttattccaggagtc
tcccaggctgtccgtgcagagcctctgctcttgattgtttgcccaacacgtgagttggca
acacaaatctttgatgaaactcgccgattctgttaccgcaccatgcttcgtccatgctgc
atctatggaggaagcccgattcctgagcaattgaatcaactcgcaaagggctgtgatgtt
ctcattgctacgcctggtcgtctttgtgattttattgaccgacctcacattctatccctc
aaccgattgaggtacatggtcatcgacgaggcggatgaaatggtcggtgctgattgggac
caagagttgaagaagatcatgagtggcggtgatcaaaatacgtcgcaaatcaaatatttg
atgttttcagctacgttcaacaaggccgcacgtgaccttgctaatcaccatcttgcgatg
gatcactgcaagattcgagttggccgtgctggctctactcacaagaacattaaacaggac
atcgtctgggttgagagctctcaaaagaagaaggccctgatcgatctcctgatgtcgctc
cctccggcgcgcactatgatttttgtcaactccaagcgcggatgtgatgaagttgatgat
tatctcttcaatctcaacatgccctgtacctccattcactccgaccgcactcagagagag
cgtgaggactccatccgctcgttccgcacagctcgttgtcctatattgatcgctacgccg
gtggccgctcgtggtttggacatcgctaacgttgttcacgtgatcaattacgatcttccc
agcaactctcacggtggaattgaggaatatatgcatcgaattggtcgcactggtcgtatc
ggtaaccatggcctggcaacctcattttacaatgagagagactcggatctgggcgagatg
cttgtcaagacgttgcttgagaccaatcaagagattcctgattttctgacagacttaatc
cctgagggcttcgttcctggccaaggcgatgtaagcactttgaagttcgagatggattcc
gatgatgaggcagaggctggtggagatacatctgctgatgctgccggtggaggcgcttgg
ggtgcgaccactggtgctactggtggaggtgatgcttggggtgcgaacactggtgctact
ggtggtgatgcatggggagctaccagcggtggcggatggggtgcctga
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