Glarea lozoyensis: GLAREA_08628
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Entry
GLAREA_08628 CDS
T04883
Name
(RefSeq) Ribosomal protein S5 2-like protein
KO
K11600
exosome complex component RRP41
Organism
glz
Glarea lozoyensis
Pathway
glz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLAREA_08628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_08628
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
GLAREA_08628
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
GLAREA_08628
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
19467676
NCBI-ProteinID:
XP_008088863
UniProt:
S3CFX1
LinkDB
All DBs
Position
Unknown
AA seq
252 aa
AA seq
DB search
MPLDTSTYSLALLRLDGRRWNELRRLTAQMRTQASADGSAYLEMGNTKVICTVSGPSEGG
AVRPGGGEEAVVGVDISIAGFSGVERKRRARNDKRVAEMQNTIATAFEGVIFTKLYPRSL
ITLSLHVLAQDGSLLAACINACTLALIDAGVPMKDYIAACTAGSTSSYSSNEEAADPLLD
LNAAEEQELPFLTVATVGESDFVSVLVLETRVQVGRLEGMLAVGVDGCKQVRAILDGVVR
TRGGKILEGSTV
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgcccctcgacacatccacctactccctcgcgctccttcgcctcgacggtcgccgctgg
aacgagctccgccgtctcaccgcccaaatgcgcacgcaggcctccgccgacggctccgcg
tacctcgagatgggcaacaccaaggtgatttgcacggtgtctgggccgtctgaggggggt
gctgtccgaccgggcggcggcgaggaggcggtggtcggtgtggacatcagtattgctggg
tttagcggggtggagaggaagaggagggcgaggaacgataaacgcgtggcggagatgcag
aatacgatcgcgacggcttttgagggggtgattttcacgaaattgtatccacgctcgctc
atcacgctgtcattacatgtcctcgcgcaagacggttcgctgctcgcggcgtgtatcaat
gcgtgcacgctcgcgctgatcgatgcgggtgtgccgatgaaagactatatcgcggcgtgt
acggcagggagcacgagcagctacagcagtaacgaggaggctgcggatccgctgttggat
ttgaatgctgcggaggagcaggagttgccgtttttgacggttgcgacggtgggggagagc
gatttcgtgagtgtgttggtattggagacgagggtgcaggttggacggttggagggtatg
ttggcggtgggggtggatgggtgtaaacaggttagggcgatattggatggggttgtgagg
acgagaggggggaagattctggaggggtcaacggtttga
DBGET
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