Glarea lozoyensis: GLAREA_09923
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Entry
GLAREA_09923 CDS
T04883
Name
(RefSeq) Ribonuclease H-like protein
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
glz
Glarea lozoyensis
Pathway
glz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLAREA_09923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_09923
Enzymes [BR:
glz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
GLAREA_09923
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
GLAREA_09923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
DNA_pol_A_exo1
RNase_T
Motif
Other DBs
NCBI-GeneID:
19468970
NCBI-ProteinID:
XP_008084710
UniProt:
S3CQV1
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MEVDNSQYKRQLLSILKHIANATFVTFDLEMSGISTRRQYGTGDRSQKVDKPTLQEIYEE
MKDAASTYQVVQFGITCIEEDREKEFYLARPYNFYLSPLQAAGVDIRLERDFTFSSSACE
FLLKNDFNFGTLFKSGVPYLSRTEEDVHREEYQARTSRTSTIPDLIIPASDTTNLTFYRK
ARSTISEWINSSKPEFDFVNVGSVLDPTSGYQRRLIYQLIRSEFPGLRAFPRGGKEFMQV
VKVDVKREAEFQKRKDESFEAGLAKQIGLRWIFEALSGGNLDGINPRWFYVEGKDGDETK
PENQLDAIVKDVEKVKLALLKKQHIIVGHNLFTDLGFLYNTFVGILPEKVSHFQEEIHEL
FPRVFDTKYIATHGREGMGSSSALAQLLEPFKSIHEPLVVLHEKHTSYGSGKDHEAGFDS
WMTAELFVKLTSTLFEERRLGLLDANIENSDLDSSCDDDVGGVTLNVPDTDGGFFSDSES
GEGNVPAAWHAVQLNRFSVLADGGGEDKIAETTTTVKPSPFMPPIKSSFWDVYVNKLRVN
AAEGGICHLATDE
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggataactctcaatacaagcgacaactgttatcgatcttaaagcatattgca
aatgccactttcgtaactttcgatctggagatgagtgggatctctacccgtcgtcaatat
gggacaggagatagatctcaaaaggttgataaaccaactttgcaagaaatctacgaggaa
atgaaggacgccgcctccacatatcaggtagttcaatttggcatcacatgtatcgaggaa
gacagggagaaagaattctatctagctcggccctacaacttctatctgagtccactccag
gctgctggtgttgacattcgacttgagcgcgacttcaccttctccagtagtgcatgcgag
tttttactcaaaaatgactttaattttggcacattatttaaaagtggtgttccatatcta
tcaagaacggaagaagacgtgcaccgagaagagtatcaagcaaggaccagccgaacttct
acgattccggatcttattattcctgcaagcgatacaacgaatctgaccttctatcgaaag
gccagaagtaccatatccgagtggatcaacagctccaagccagaatttgattttgtgaac
gtcggaagtgtattggatcccactagcggataccaacgtaggcttatttatcaacttatt
cgtagcgagtttccaggcctgcgcgctttcccaagaggtggaaaggagtttatgcaggtt
gtcaaggtggatgtaaaaagagaggcagagtttcagaagagaaaagacgagtcattcgaa
gctggccttgcaaagcaaattggtctgcgctggatttttgaggctttatccggtggcaac
cttgatggaatcaatccacgatggttttacgtcgaaggcaaagatggtgatgaaacgaag
ccggagaaccaactcgacgcaattgtcaaggatgttgaaaaggtcaagcttgcactgttg
aaaaagcaacatatcattgttgggcacaaccttttcaccgacctcggttttctttataat
accttcgtcggcatcttacccgagaaggtatctcactttcaggaggaaatccacgaattg
ttcccgagggtctttgataccaagtatattgctactcacggccgggaaggaatggggtca
agttctgcactagcacagcttctagagcctttcaaatccatccatgaaccgcttgttgta
ctccatgagaagcacacttcgtacgggtcaggaaaggatcatgaagctgggtttgatagt
tggatgacggcagagcttttcgtcaagctaacgtcaacgctgttcgaggaaagacgattg
gggctgctagatgcaaacattgaaaatagcgatctagactcatcctgcgacgatgatgtg
ggaggggttacgctgaacgtacccgataccgatgggggtttcttctccgattccgagtct
ggcgaaggaaatgttccagcagcttggcacgcggtgcaattgaatcgattttccgtcctc
gcggatgggggcggggaggataaaatagcagagacgacaactacagtgaagccctcacca
ttcatgccgccaataaagagtagtttctgggatgtttacgtcaataaactgcgcgtgaat
gctgccgagggaggaatatgccatttggcgactgacgaatag
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