Glarea lozoyensis: GLAREA_10396
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Entry
GLAREA_10396 CDS
T04883
Name
(RefSeq) WD40 repeat-like protein
KO
K12857
Prp8 binding protein
Organism
glz
Glarea lozoyensis
Pathway
glz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLAREA_10396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
glz03041
]
GLAREA_10396
Spliceosome [BR:
glz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
GLAREA_10396
Complex C
U5 SnRNP specific factors
GLAREA_10396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_NOL10_N
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
19469443
NCBI-ProteinID:
XP_008078637
UniProt:
S3D875
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MSTEKRARAGSDDFRSTQMVVKRPNLGGESKAVTRVNGSAANGALVQAGPRTTGLQAPVM
ELSGHTGEVFCAKFDPNGNFIASGSMDRSILLWRTFGACENYGVLNGHKGAILDLHWSRD
SRVLFSASADMHLASWDLETGSRIRRHVGHEEVINTMDISKRGEELLISGSDDGYIGIWD
PRTKNAVDFIETEFPVTAVALAEAGNEIYSGGIDNDIKVWDMRRKAVVYSMYGHHDTITS
LRISPDSQSLLSNSMDSTVRTWDIRPFAPTERHIRTFDGAPSGMEKNLIKASWDSDGKKI
AAGAGDGTAVVWNSQNGKMLYKLPGHKGTVNCAELSPSSDPIILTGSSDRNLLLGELK
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacagaaaagcgtgcgcgcgctggttccgatgacttccgttcaacgcagatggtg
gtgaagaggccgaatcttggtggtgagagcaaggctgttacacgagttaatggttcagca
gcaaatggcgccctggttcaagcgggaccaaggacgacggggcttcaagctcctgtcatg
gagttgagtgggcatactggagaggtgttttgcgcgaagtttgatccgaatgggaatttc
attgcttcggggtctatggataggtcaatattactatggagaacctttggggcctgcgag
aactatggtgttttgaatggtcacaagggagcgattcttgatttacattggtcgcgcgac
tcgagagtattgttttcagcatctgcggacatgcaccttgcgagttgggatttggaaaca
ggatctaggattaggagacatgttggacatgaagaggttataaacaccatggacatcagc
aaacgaggagaagagctgctcatcagtggatctgacgatggatatatcggaatatgggat
cctcggacgaagaacgcagtggactttatcgagacggaatttccagtaacagctgttgcg
ttggctgaggcggggaatgagatctattctggtggaattgataatgatatcaaagtatgg
gatatgaggaggaaggctgttgtttattcgatgtatggccatcatgatactatcacttcc
ctacgcatttccccagactctcaatcgcttctttcgaactcaatggattcaaccgtacga
acatgggatattcgaccttttgcgccaactgaacgacacattcggacattcgatggagct
ccctcaggaatggagaagaatcttatcaaggctagctgggactctgatggcaagaagatt
gcagctggtgcaggcgacggtactgcagtagtctggaattcccagaacgggaaaatgctg
tataaattaccaggccataaaggaacggtcaactgtgcagaattgtcgccatcttcagat
cctatcatcctcaccggatcatcagaccgtaatctacttctcggagaacttaaatga
DBGET
integrated database retrieval system