Glarea lozoyensis: GLAREA_10412
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Entry
GLAREA_10412 CDS
T04883
Name
(RefSeq) beta and beta-prime subunits of DNA dependent RNA-polymerase
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
glz
Glarea lozoyensis
Pathway
glz03020
RNA polymerase
glz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GLAREA_10412
09124 Replication and repair
03420 Nucleotide excision repair
GLAREA_10412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
glz03021
]
GLAREA_10412
03400 DNA repair and recombination proteins [BR:
glz03400
]
GLAREA_10412
Enzymes [BR:
glz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GLAREA_10412
Transcription machinery [BR:
glz03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
GLAREA_10412
DNA repair and recombination proteins [BR:
glz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
GLAREA_10412
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
CtIP_N
Motif
Other DBs
NCBI-GeneID:
19469459
NCBI-ProteinID:
XP_008078653
UniProt:
S3E8V2
LinkDB
All DBs
Position
Unknown
AA seq
1263 aa
AA seq
DB search
MAEYEEAYEYDDYEEEDAGITAEDCWAVISSFFESKGLVSQQLDSFDEFVSTTMQELVEE
NSQLTLDQNNPPSSDDNPIALRRYEIKFGTVLLSRPAMTEGDGTTAVMLPQEARLRNLTY
SSPLYLEMTKKVSVAVERPVSLNEMDEEQLAEHHRTGEFPTRLLWEDEDSGQEITAAGDK
QDKIDRVYIGKLPIMLKSKYCILKDLDEDELYGWNECPYDQGGYFVINGSEKVLIAQERS
AANIVQVFKKPLPSPTPYIAEIRSALEKGSRLISSMTIKLFAKGDGQRGGFGQTIKSTLP
YVKSDIPIAVVFRALGVVSDEDILNHICYDRSDTQMLEMLKPCIEEAFVIQDREVALDFI
GKRGNSNTLTRDKRVRHARDIMQKELLPHISQKEGSETRKAFFLGYMVHKMLQCALGRRE
CDDRDHFGKKRLDLAGPLLAKLFRNLFKRLTGDVYKYLQRCVENNREFNLTLGVKSTTLT
NGLKYSLATGNWGDQKKAAQSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKIAKPRQL
HNTHWGLVCPAETPEGQACGLVKNLALMCYVTVGTPSDPIIEFMIQRNMEVLEEYEPLRS
PNATKVFVNGVWVGVHRDPAHLVRTVQHLRRSHLISHEVSLIRDIRDREFKIFTDAGRVC
RPLFVIDNDVDSQNKGNLVLNKDHVRRLEEDQLMPANMDLEQKAEAGYFGFQGLINAGVV
EYLDAEEEETVMIVMTPEDLDISRQLQAGYALRPDESGDLNKRVKAPMKPTAHIWTHCEI
HPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGVFLTNFDVRMDTMANILYYPQKPL
ATTRSMEFLKFRELPAGQNAIVAIACYSGYNQEDSVIMNQSSIDRGLFRSLFYRAYTDQE
KRIGMNVVEQFEKPFRSDTLKLKHGTYDKLDDDGIVAPGVRVSGEDIIIGKTAPMAPDAE
ELGQRTKAHTKRDASTPLRSTENGIVDQVLITTNAEGLRFVKVRMRTTKIPQIGDKFASR
HGQKGTIGITYRMEDMPFTSQGIVPDLIINPHAIPSRMTIAHLIECQLSKVSTLRGLEGD
ATPFTEVTVDSVSKLLRDHGYQSRGFEIMYHGHTGRKMMAQVFLGPTYYQRLRHMVDDKI
HARARGPVQILTRQPVEGRARDGGLRFGEMERDCMISHGAAAFLKERLFEVSDAFRVHLC
DICGLMTPIAKLQSQNFECRSCKNKTRISQIHIPYAAKLLFQELASMNIAARMFTERSGI
SVR
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatatgaggaagcctacgagtacgatgattatgaggaagaggatgcaggaatc
acggccgaggactgctgggcagtcatatcgtcatttttcgagtccaaaggtctggtctcg
cagcagttggattcctttgacgaattcgtttctacgaccatgcaggagttggtggaggaa
aactctcaactcaccctcgaccagaataatccgccatcctcggatgacaatccgatcgcc
cttcgacgatatgaaattaaattcggaacagtcttgttatcacgacctgccatgaccgaa
ggagatggcaccacggctgtcatgttgccacaggaagcccgtctacgaaacctgacctac
tcgagtccactctacctcgaaatgacgaagaaggtctcggtagcagtcgagcgcccagtc
tctctgaatgagatggatgaggagcaactagcagaacatcacagaactggagaatttcca
acaaggcttctttgggaggatgaagattcgggacaggagattacagccgctggtgataag
caggataagatagacagagtttatatcgggaagctcccaatcatgctcaagtctaaatac
tgtattctcaaggatctcgacgaagacgaactttatggttggaacgaatgcccgtacgat
cagggaggctactttgttatcaacggaagtgaaaaagtcttgattgctcaggagcgcagt
gcagccaacatcgtccaggttttcaaaaagccccttcccagtccaactccttatatcgca
gagattcgaagcgccctggaaaagggatcccgactcatttcttcgatgaccatcaagctt
ttcgcaaaaggcgatggccagagaggtggtttcggccagacgatcaagtctactcttcct
tacgtcaaaagcgatattcctatcgcagtggtgttccgagctctcggtgttgtttctgat
gaggatattctaaaccacatctgctacgaccgaagcgatacacaaatgttggaaatgctt
aagccatgtatagaagaggcttttgtcatccaagatcgtgaggttgcattggactttatt
gggaagcgtggtaatagcaatactttgacgcgtgacaagcgtgtcagacatgctcgtgat
atcatgcagaaagagctgttgcctcatatttcacaaaaggagggcagtgaaacccgaaaa
gcattcttcttgggctacatggttcacaagatgttgcagtgtgctctaggacggcgagaa
tgcgatgatcgagatcactttggaaagaagcgtctggatcttgctggtcccctgctcgca
aagctcttccgcaatctctttaagagactgacgggggatgtttacaagtatctacaacga
tgtgttgagaacaaccgagagttcaatttgacacttggagtgaaatccaccacattgacg
aacggactcaaatactcgttagctactggtaactggggagatcagaagaaagctgcacaa
tcgactgctggtgtatctcaggtgctcaatcgctacacctttgcgtctacactgtcacat
ttacgtcgtaccaacactcctataggacgtgatggaaagatcgcaaaacctcggcagtta
cacaacactcactggggtttggtctgcccggctgaaacccctgaaggtcaagcttgtgga
cttgtcaagaatttggctctgatgtgttatgtcactgttggtactcccagtgatccgatt
atcgagttcatgattcaacgtaacatggaagtcttggaagaatacgagccgttgcgctcg
cccaatgctaccaaagtgtttgtcaatggagtgtgggttggggtccatcgtgacccagct
catttggttcgtaccgtgcagcaccttcgtcggtctcacttgatttcacacgaagtatct
ttgatccgagatattcgagacagagagttcaagatcttcacagatgcaggcagagtgtgt
cggccccttttcgtcatcgataacgatgtcgacagccagaataagggcaatttagtttta
aacaaagatcacgtaagaagactggaagaggatcaactcatgccagccaatatggatctg
gaacaaaaggcagaagctgggtattttggtttccaagggcttatcaatgccggtgtggtt
gagtacctagatgccgaagaagaggagaccgtcatgatcgtcatgacgccagaagatttg
gatatatctcgtcaactgcaagctggttacgcgcttcggccagacgagagtggagatctg
aacaagcgtgtcaaggcgcctatgaaacctacggcgcacatttggacgcattgtgagatc
catccaagtatgattctgggtatttgtgcgagcattattcccttcccggatcacaatcag
tctcctcgtaatacttatcagtctgctatgggtaagcaagctatgggtgttttcctcact
aacttcgacgtacgtatggataccatggcaaatatcctctactatcctcagaagccgctt
gcaacaacccgttcaatggagttcctcaaattccgtgaacttcctgctggacaaaacgcc
attgtagctatcgcttgttactctggttataaccaagaagattccgtcattatgaaccag
agcagtattgatcgtggactcttccgaagtctgttctaccgtgcatacaccgaccaggag
aagcgaattggtatgaatgttgtggagcaatttgagaagccattccgctctgatacactc
aagcttaagcacggtacatatgataagcttgatgatgatggaatcgttgccccaggtgtt
cgtgtctccggagaagacataattattggaaagacagcgccaatggcacctgacgcagag
gaactcggacaacgtacaaaagctcacacaaagcgtgatgcttccaccccgttgcgaagt
accgaaaatggtattgttgatcaagtgctgattacaaccaatgctgaaggtcttcgcttc
gtcaaggttcgcatgcgtacaacgaagattccacagattggtgacaagtttgcttcccgt
cacgggcagaagggtacaatcggtatcacctatagaatggaggatatgcctttcacaagc
cagggtatagttccagatctaattatcaacccccacgccattccgtcgcgtatgactatt
gctcatttgatcgagtgtcaactgagtaaggtctcaaccctccgtggtctggagggtgat
gcaactcccttcaccgaagtcaccgttgattccgtgtcaaaactgttgcgtgatcatggg
taccagtctcgagggtttgaaatcatgtatcatggacatacgggaagaaagatgatggcc
caagtcttccttggaccaacctattaccaacgtcttcgtcacatggtcgatgataagatc
cacgctcgtgcgagaggaccggtacagatcttaacaagacagccagtggaaggtcgtgcg
agagatggtggactgcgtttcggagagatggaacgtgattgcatgatttctcacggagct
gctgctttcttgaaagagagattgttcgaagtttctgacgctttccgcgtgcatctttgc
gatatctgtgggctaatgacccctattgcaaagcttcaatctcagaacttcgaatgccga
tcttgtaaaaacaaaacaagaatctctcaaatccatattccatatgccgctaagctactt
ttccaagagttggcatcaatgaatattgctgcaagaatgttcaccgagaggtctgggatt
tcagtgcgttaa
DBGET
integrated database retrieval system
