Glarea lozoyensis: GLAREA_10435
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Entry
GLAREA_10435 CDS
T04883
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
glz
Glarea lozoyensis
Pathway
glz03013
Nucleocytoplasmic transport
glz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GLAREA_10435
03015 mRNA surveillance pathway
GLAREA_10435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_10435
Enzymes [BR:
glz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
GLAREA_10435
5.6.2.5 RNA 5'-3' helicase
GLAREA_10435
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
GLAREA_10435
mRNA cycle factors
Common to processing body (P body) and stress granule
GLAREA_10435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
DEAD
Viral_helicase1
UvrD-helicase
SLFN-g3_helicase
NPHP3_N
PIF1
Helicase_RecD
nSTAND3
AAA_22
ATPase
AAA_16
PhoH
AAA_10
Motif
Other DBs
NCBI-GeneID:
19469482
NCBI-ProteinID:
XP_008078676
UniProt:
S3DS05
LinkDB
All DBs
Position
Unknown
AA seq
1095 aa
AA seq
DB search
MEGAFTHLGNHLISDSAAAINAGADDLSNLDPDENLLYGQYGGRGGLGPSRRRNDDDDNE
TEVFDDDDAESLASMPVEGMKTLGLRGVEDEKELPAHACAYCGIHSPSCVVKCLGCTKWF
CSARGNATSSHIVNHLVRARHKEVQLHPLSTLGDTVLECYNCGTKNVFLLGFIPAKSDTV
VVLLCRQPCASTPSSKDMSWDISRWQPLIEDRSFLPWLVSVPTDSEQLRARHLTPPMIAK
LEEMWKDNSSATIADLEKAAGIDDDPAPVLLKYDDAYQYQNVFGPLVKIEADYDRKLKEA
QSEDGLIIRWDYGLNNKHLASFVLPKIELGDVKLAVGDEMRLKYKGELRPVWEGVGYVIK
IPNNQSDEVTIELRKVGNDKSVPTECTHNFSADYVWKATSYDRMQLAMRTFAVDEMSVSG
YIFHKLLGHEVAAAPMKIQMPKKFSVPGLPELNSSQINAVKSVLQKPLSLIQGPPGTGKT
VTSATIIYHLAKVNGGQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVESTVGFL
SLHEQVRMNDSNLELTKLSQLKGELGELSSQDEKKFKTLTRAAEREILNSADVICCTCVG
AGDPRLAKMKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAG
LNQSLFERLVILGLAPIRLNVQYRMHPCLSQFPSNMFYEGSLQNGVTMQQRLRRDVDFPW
PVGDTPMMFWSNLGNEEISASGTSYLNRTEASNVEKIVTRFFKAGVQPQDIGVITPYEGQ
RSFVVSSMQNTGTFKKENYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRL
NVALTRAKYGLVILGNPKVLSKHPLWHYLLLHFKERNCLVEGPLSNLQTSLLQFSRPKTT
YRGPQRYQMAHSSFNGRSGAPGKAPQDYDAGSIMSYIPDDVSSVHSSALGGAGVGSAYPQ
MFNNFNPDTWPGLDPRARQNGQKARGRGPESVTGESVAASEVTDTTSSVIDGKGIGQGGV
SLGSGLHDVAQKQTSLSQSDRLKRYVESGGRIADYKTGDAGSVFGSSSLLSGRRLDDDEK
SVSTAFASQIGGGYD
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgcatttactcacctcggaaaccacttgatctcagactctgcagctgcgatc
aatgcaggcgccgacgacctttcgaacctcgacccggacgaaaaccttctctacgggcaa
tatggtggacggggcggcctgggacctagcagaagaagaaacgacgacgatgataatgag
accgaggtcttcgacgatgatgatgcggaaagtttggccagcatgccggtggagggaatg
aaaactctagggctcagaggagttgaggatgaaaaagaactgccagctcatgcttgcgca
tattgcggaatacactcccctagctgtgttgtcaagtgtctaggatgtacaaaatggttt
tgtagcgctcgggggaatgcgacttcttcccatattgtcaatcatcttgttcgggcccgt
cacaaggaagttcagcttcatcctctgtccacgctgggagatacggtcctcgaatgttac
aactgcggtaccaagaacgttttccttctcggatttattccagcgaaatctgatacggta
gtcgttctactgtgtcgccaaccttgcgcttccactccgtcttcgaaggatatgagttgg
gacatctcccggtggcaaccacttatcgaagatcgttcattcctaccatggttggtgtcc
gtgccgacagactctgaacagctccgtgctcgacatttgacgccaccaatgattgcaaaa
ttagaagaaatgtggaaggataactcaagtgccactattgccgaccttgagaaagctgcc
ggaattgacgacgaccctgcgcctgtgcttttgaaatacgacgatgcgtaccagtaccag
aatgtttttgggccacttgtcaagattgaagcagactacgatcgaaagctcaaggaagcg
caatccgaagatggtttgatcatccgttgggattatggtctcaacaataagcatcttgca
agcttcgtcttgccgaaaatcgagcttggcgatgtaaaacttgcagtcggcgatgaaatg
cgtctgaagtacaagggagaattgcgacctgtctgggaaggtgttggctatgttatcaag
atcccaaacaaccagtctgacgaggtcacaatcgaattgcgaaaagttggcaacgacaaa
tcagtaccaactgagtgcacccataatttctctgccgattatgtttggaaggcgacctcc
tatgaccgtatgcagcttgcaatgcgaacctttgcagttgatgaaatgagtgtgtctggg
tacatctttcacaaactcttgggtcacgaggttgctgccgctccaatgaagatccagatg
ccaaagaaattcagcgtaccaggtcttccggagttgaatagtagtcagatcaacgcagtc
aagagcgtgttgcaaaagccactgagtcttatccaaggacctcctggtactggaaagacg
gtcacttcagcaacaatcatttatcatctagccaaagtgaacggcggtcaggttctggtc
tgcgcaccgtccaatgttgcagttgatcaactttgtgagcgcattcatcgaactggtctc
aaagttgtccgcctcacagcaaaatctcgtgaagatgtggaatctacggttgggttcctg
tctctacacgagcaggttcgaatgaacgacagcaatctcgaactcaccaaattgtctcaa
ctcaagggcgaacttggagaattgtccagccaggatgaaaagaaattcaaaacacttaca
cgagctgccgaacgagagattcttaacagtgcagatgtcatttgctgtacttgtgttggt
gctggagatccacgtttggccaagatgaaattcagaactgtgctcattgacgagtctact
cagtccgctgaaccggaatgtatgatccccttggtacttggctgcaaacaagttgttctt
gttggagatcatcagcagttgggtcccgtcattatgaacaaaaaggccgccaaagctgga
ctcaatcaatcgttgtttgagcgacttgtcattctcggactcgcaccaattcgcttgaat
gtgcagtaccgaatgcacccttgtttgtcacaatttccatcgaacatgttctatgagggc
tctctccagaacggtgtcacaatgcagcagaggctccgtcgcgacgttgacttcccatgg
ccagttggagatacaccaatgatgttctggtctaaccttggaaacgaagaaatttctgca
tctggtacttcctacctcaatcgaaccgaagcgtccaatgttgaaaagattgtcactcga
ttcttcaaagccggagttcagccacaagacattggagttatcactccctatgagggccag
cgaagttttgttgtcagttccatgcaaaatactggcacattcaaaaaggaaaattacaag
gagattgaggtcgcttccgtcgatgctttccaaggccgagagaaagacttcattgtgctc
tcttgtgtccgttccaacgaccaccaaggtattggtttcttgagcgatccgagacgtctg
aatgtcgctctgactcgtgccaagtatggtcttgtcattctcggaaatccaaaggtcttg
tcaaagcatccgctctggcattatttacttcttcatttcaaggaacgcaactgtttggtc
gaaggacctctttcgaatttgcaaacgtcccttcttcagttcagccgacccaagacaacc
tatcgtggcccacaacgttaccaaatggcacattcctcatttaacggacgctccggcgca
cctggaaaggctcctcaagattatgatgctggatcgatcatgagctatatccccgacgat
gtctcttccgtacattcatcggctcttggaggtgcaggagttggttccgcttacccacag
atgttcaacaacttcaaccctgacacttggcctggtcttgatccccgtgctcgtcaaaat
ggacagaaagctcgaggacgtggaccagagagcgttactggagagtctgttgcagcaagc
gaggttaccgataccaccagcagtgtcattgatggcaaagggattggccaaggtggcgta
agccttggatctggacttcacgatgttgctcaaaagcaaaccagtctgagtcaatccgat
cgcttgaaacgctatgtcgaatccggtggtcgtattgcagactacaaaactggtgatgcc
ggtagcgtattcggttcaagctcattgctcagtggccgacgtctagacgatgacgagaaa
agtgtttcgactgcttttgctagccagattggtggcggctacgactga
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integrated database retrieval system
