Glarea lozoyensis: GLAREA_10663
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Entry
GLAREA_10663 CDS
T04883
Name
(RefSeq) TPR-like protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
glz
Glarea lozoyensis
Pathway
glz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLAREA_10663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_10663
03041 Spliceosome [BR:
glz03041
]
GLAREA_10663
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
GLAREA_10663
Spliceosome [BR:
glz03041
]
Complex B
Other components
Prp19-related factors
GLAREA_10663
Complex C
GLAREA_10663
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_8
Mad3_BUB1_I
RPN7
ARM_TT21
RACo_linker
TPR_16
Motif
Other DBs
NCBI-GeneID:
19469709
NCBI-ProteinID:
XP_008077955
UniProt:
S3E9I4
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MAAPVVSKSSKAKLSRGKPDLYLISEEDTIYEQDILRDPGTVKPWLAYIDFKLRHGSLHE
QAYVLERACRQLPRSYKLWKMYLTLRMKHLDKLNPAIFASEYAKVNSLFERALILLNKMP
RIWEMYLSFLLLQPIVTLTRRTFDRALRALPITQHNRIWALYRPFANSASGETALKIWRR
YMQIHPEDAEDFIELLIENERYTEAVKKYMEILNNPKFRSKNGKGHYQLWSEMVDLLVEH
AKEVETGDESGIDVERIIRSGIERFADQRGKLWSGLATYWITRGSFERARDVFEEGITTV
MTVRDFTLIFDSYVEFEEAITGALMEEAAVRSEKGIVNENADFDLDIRMMRFEQLMDRRP
FLINDVLLRQNPNSVSEWNVRVGLWGSNNQEVVKTYTDAIAAIQPKKAVGRFHELWANYA
KFYEKGGDLRNARTIMEKAVKVPFKSVAELADMWLEWAEMELRNDNFEDAMKIMAKAVQA
PKRSTVDYFDETLSPQQRVHKSWKLWSFYVDLVESVSTLEETRKIYERIFELRIATPQTV
VNYANLLEENQYYEESFKIYERGLDLFSYPVAFELWNLYLTKAVDRKIGIERLRDLFEQS
VEGCPPKFAKVLYLMYGNLEEERGLARHAMRIYERATRAVSDEDRADMFNFYITKSASNF
GLPSTRPIYERAIAALPDKDARDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTSPAF
WSKWEQFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQALARAKEVAAGAGEDGDED
GSADAMAALEREARAPVGFVAASSGPQKGNMAPQSSVIEANPEAIDLDDD
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcagctccggttgtctcgaagagctcgaaagcgaagctgtcacggggaaagccggac
ttgtatttaatttccgaagaagacacgatttacgagcaggatatccttcgcgatccaggg
actgtgaagccgtggctggcatacatagatttcaagttacgacatggtagtcttcatgag
caggcttatgttctcgagcgagcttgtcgacagctaccccgttcttataagctatggaaa
atgtatttaactctccgtatgaagcacctagacaagctcaatcccgcgatattcgcatcc
gaatacgccaaggtcaattccctcttcgaaagagctctcatccttctgaacaagatgccg
cggatctgggaaatgtatctgtcatttctactccttcagccaattgttacccttacgcga
cgcacgttcgatcgagccctccgcgcattaccaattactcaacacaaccgaatctgggcg
ttgtacagaccttttgcgaactctgcttctggtgagacggcgctcaaaatatggaggagg
tacatgcagatccatccggaggacgcagaagatttcatcgagttgttaattgagaacgag
cggtacaccgaagctgtaaagaaatacatggaaatattgaataatcctaagtttcgaagc
aagaatggaaaaggccactatcagctctggagcgaaatggttgatctattagtcgagcac
gcgaaggaagtcgaaacaggagatgagtccggaatcgacgtggaaaggataattcgaagt
ggtatcgaaaggtttgccgatcagagggggaagctttggtctggactagcgacgtactgg
attacacgaggtagcttcgaaagggcacgcgacgtattcgaggaaggtatcacaactgtg
atgacggtgcgcgacttcaccctcatatttgattcctacgttgagttcgaagaagcaatt
actggagccttgatggaggaagctgctgtacgatcggagaagggaattgtaaatgagaac
gccgactttgacttggatatccgcatgatgagattcgagcaattgatggacaggcggccg
ttcctgattaacgacgtcttactacggcaaaaccccaacagtgtttcagaatggaacgtc
agggttggattatggggctccaataatcaggaagtagtcaagacttacacagatgcaatt
gcagctatacaaccaaagaaagccgttggacggttccatgaattatgggcgaattatgcg
aaattctacgagaagggtggcgacctgcgaaacgctcggacaattatggaaaaggcagtg
aaggtgcccttcaagtcggttgcagagcttgctgatatgtggctcgagtgggctgagatg
gagctcaggaatgataattttgaggatgcgatgaagattatggcgaaagccgttcaggca
ccgaaacgatcaactgtcgattactttgacgagaccctctcacctcagcagcgagtccat
aagagttggaagctatggagtttctatgtggacttggtagagagtgtcagcacactcgag
gagacgaggaaaatctacgaaaggatcttcgaactccggattgcaactccacaaacggtc
gtcaattatgccaaccttctggaagaaaaccagtattacgaggaatctttcaagatctat
gaacggggccttgatttgttcagctatcccgttgcttttgagctatggaacttgtatctt
acaaaggctgtagaccgcaagataggcattgagcgtcttcgtgatctattcgagcaatcc
gtcgagggatgtccgcccaaatttgccaaagttctctaccttatgtatggcaatttagag
gaagagcgcggacttgcacgccatgctatgcgtatctacgaacgagcgactcgtgctgta
tccgacgaggacagggccgatatgttcaatttctacatcaccaaatcagcatccaatttc
gggcttccatccacgcggcctatttacgagcgagccattgctgcgcttccggacaaagat
gctcgtgacatgtgtctaaagttcgcagacatggagaaaagacttggagaaatcgatcgt
gcgagggctatctacggccacgcctcgcaattctgcgatcctcgaacaagccctgccttc
tggtcgaaatgggaacagttcgaagtccagcatggaaacgaagatactttcaaagaaatg
ttacgtatcaagcgaagcgtccaggcacagtacaacactgacgtcaattttattgctagt
caggcgcttgccagggctaaggaggtcgcagctggtgctggtgaggacggcgacgaggac
ggaagcgccgacgcgatggctgctctggagcgcgaggccagagcgcctgtcggcttcgtg
gcagctagctcggggcctcagaaaggtaacatggcaccacagagctctgttattgaggcg
aatccggaggctattgatttggatgacgattaa
DBGET
integrated database retrieval system
