Glarea lozoyensis: GLAREA_10666
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Entry
GLAREA_10666 CDS
T04883
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
glz
Glarea lozoyensis
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
glz03036
]
GLAREA_10666
Chromosome and associated proteins [BR:
glz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
GLAREA_10666
microRNA pathway
RISC loading complex
GLAREA_10666
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dimer
DSRM_2
Ribonucleas_3_3
ResIII
Helicase_C
DEAD
dsrm
LPP
Motif
Other DBs
NCBI-GeneID:
19469712
NCBI-ProteinID:
XP_008077958
UniProt:
S3DSM5
LinkDB
All DBs
Position
Unknown
AA seq
1765 aa
AA seq
DB search
MTRDGYLQDLCLLTDDCLLPILDQETALINNSNSKLPLLSWTSIDISQVTLEQLKQIDAP
EISSAHESNEYITASVDYNVGSLHSIGSEREIHSLISFDNHLSESFQSEISSLLDTFVDK
LRFPSPSTILIPQSLNNITNLASLPKDKNPFEGSSENFQSLPRMDLPMDTTPTPHPFNPI
LPQRSTVDVIADLKRQLHHPKDAASTGDTTAAPTEPNAFLTLNNPASEKDQKVATELTTQ
DDGEHSSEDDDEEEEDDHPTTGPRKLTERKRRLHAIADSWVQESIRNPSKDIKVSAEEEG
SQSTKWLVNQYENREIISTPREYQHELFERAKEKNIIAVLDTGSGKTLIAVLLLRHILAQ
ELEDRAIGKPKRVAFFIVDSVTLLFQQHAVLKANLSQPMDIFCGDMGTNSWKRARWEENF
QKNMVIVCTAEVLRQCLHHSYISMDRINLLIFDEAHHAKKDHPYARIIKDFYFQTPKTST
LPKVFGMTASPVDARVDPKKAAAELEALLNCEIATAADTSLLQHAASSMQEEVVAYAPLR
PKFETPLLSQVNTHLKDSKVLKKLLLFAGEATRELGSWCSDELWRFCTEDQEFKKLKAKT
ERKYLERKNTPLEVLHQQQANLEMLQAVVKSHVFEPPDYKDFESHTCVSKNLSSKVSILV
SYLRERFERPTDDKCIIFVKQRFTARVLYQLLSHNNIRTPYLFVGVLVGTRVSEAGDVNS
SFREQVVTMMKFRKGLLNCLIATSVAEEGLDIPDCNLIIRFDLYDTLIQYIQSRGRARHQ
NSRYIHMIESGNWDHQKTIREVRLNEGILKNFCNQLPEDRKLTGNDFNMDHFLAKERTHR
NFVHPKTGAKLTYKSSLRVLANFVDSLPHGPDMNLHAEYVITVQNKQFIGEVVLPEESPI
RGVVGRPASTKQVAKCSAAFETCLLLIKGKYLDEFLLPIYTKQLPVMRNALLAVDSKKRE
KYDMRTKPKLWSSGEIADELFVSVLRLNSPESLGRQSQPLVLLARSPMPALPSFPLHFGG
GKHSYVQCNPLSKPLKVSSELLTQINSFTLCVFEDIFSKPFESDTSKMPYFLAPLKEDGI
LNHDGDPSNILDCEILTEVHQYQLQFQTKRVNEFKFWQNEPDEFFKDKYIVDVYEGSRKF
WCKGVAPQYKPLDPVPDNCAPRKRDKQKKAENIMEYSKSLWKKHQVTLDPNQRVFEAELI
PLNRNMLDERETTEKKTATRCFLIFEILKISALPAKVVSMAYLFPSIIHRIEAYLVALEA
CELLKLNIRPDLALEAVTKDSDNSGDHDEKKINFQHGMGNNYERLEFLGDCFLKMATSIS
LYGTHPDHDEYAYHVDRMMLICNKNLCSNAIKLRLYEYIRSQTFSRDAWYPEGLVLKAER
RGKKISVIKSHALGDKTIADVCEALIGAALLSTNDPKNMDNAVRAVTELVCSENHSVTSW
SDYYKLYRKPEFQTKVATEMQRDLARQVEHAHPYHFRWPRLLRSAFIHPSYPYSYEKIPS
YQRLEFLGDALLDMACINFLFHQYPGKDPQWLTEHKMAMVSNQFLGCLCVELGFHTHLLI
FNTAFQKQISDYVTEITEAKTQAQDEAQRAGKAREDYSPDYWISVRPPPKCLPDIVEAYV
GAMFVDSEYNYSEVEGFFDAHVKWYFKDMSIYDTYANKQPTTFLTNFLQVSMGCMDWAII
GKDIPSIDGSKPKTAAVVIVHETVVAEGRAESGRYAKVAAAKKALEILKGLPTRDFRAKY
RCVCKPADIEEVRAIGDLDLHGTAI
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atgacacgggacggttacttgcaggatctctgcttgttgaccgatgattgtttgctacca
atacttgaccaagaaacagcactaattaataacagcaactcaaaattaccgttactatca
tggacttcgattgatatatctcaagtgactctagagcagctgaaacaaattgatgctccc
gagatcagctcagctcatgaaagcaacgaatacatcacggcttctgttgactacaatgtc
ggttcccttcacagcataggcagcgaacgagaaattcactccctgataagtttcgacaat
catctctctgagtcattccaatccgaaatctcttctcttctggacaccttcgtcgacaaa
ctgcgcttcccttcaccttcaacaattttgattcctcaatctctcaacaatatcacgaac
cttgccagtcttccaaaggacaagaatccgttcgaaggctcatctgaaaacttccagtcg
cttccgagaatggatctgccgatggacactactccaactccgcaccctttcaaccctatc
cttcctcagagatcgaccgtagatgttattgctgatttaaagcgtcagcttcaccatccc
aaagatgctgccagcacaggagatactaccgccgctcctactgagcccaatgcattccta
acattgaacaaccctgcctcggagaaggatcagaaagttgccaccgaattgacaacccaa
gatgatggagaacattcttctgaagatgatgatgaggaggaggaagatgatcatccaaca
acagggccaagaaagctgacagagagaaagcggaggctccatgccattgctgacagttgg
gttcaggaatcgatccggaacccttccaaggacatcaaggtgagcgcagaggaagaaggg
agtcagtctactaaatggctcgtcaaccaatacgaaaaccgcgaaatcatttctacacct
cgcgaatatcagcacgagctctttgagagagcaaaggagaagaatataatcgcagtctta
gacacgggatccggcaaaaccttgatcgccgtgctccttttgcggcatatccttgcccaa
gagctcgaagaccgagctatagggaaaccgaaacgtgttgccttctttatcgtcgactcg
gtaacactgctctttcaacagcatgctgttctcaaggccaacctcagccagccgatggat
atattctgtggtgacatgggcacgaactcgtggaaaagagcacgttgggaggagaacttt
cagaagaacatggtcattgtttgcaccgcagaggtcctgcgtcaatgtctccaccactcc
tatatatcaatggatagaatcaatctcctcatctttgacgaagctcatcacgccaaaaaa
gaccacccctatgcccgaatcatcaaagatttctatttccagacacccaaaacatctaca
ctgccaaaagtctttgggatgacagcttcgcccgtggatgctcgagttgaccccaagaaa
gccgccgctgaactcgaggccctattgaactgtgagattgctaccgcggcggatactagt
cttttgcaacatgccgcctcgtcaatgcaagaggaggtcgtagcatatgcgccgctccgc
cccaaatttgagacgccactgctgagccaagtgaatactcacctgaaagatagtaaggtc
ctcaagaaactcctcctatttgcgggtgaagccacacgagagttgggctcttggtgctct
gacgagttgtggcgattttgcaccgaagatcaagagttcaaaaagctcaaggcgaagacc
gaacgaaagtatctagagcggaagaatactcctttggaagtgctgcaccaacaacaagca
aacctagaaatgttacaagctgttgtcaagtcgcacgtcttcgaaccaccagactacaag
gatttcgagagccacacatgtgtgtccaaaaatctgtcatcaaaagtttctatccttgtt
tcatatctgagagaacgctttgaacgtccgacggatgacaagtgtatcatttttgtgaag
caacggttcactgctcgtgtgctctaccaattactttctcacaataacatccgcacacct
tacttatttgtgggtgtactagttggtactcgagtaagtgaggctggagatgtcaactct
tcgtttcgagaacaggtggtgacaatgatgaaatttcgaaagggcctcctgaactgtctt
atagctacatccgttgcagaggaaggcctcgacattccagactgcaatctaattatccgc
tttgatttgtatgatacccttattcagtacatccagtcccgagggcgtgctcgacatcaa
aattctcggtacattcacatgattgagtctggaaattgggatcaccaaaagactatacgc
gaagttcgccttaacgagggcatactgaagaatttctgtaaccagttacccgaggatcgt
aagcttacaggtaacgactttaacatggaccatttcctggccaaagaaagaacgcatcga
aattttgtccacccaaagaccggcgcaaaactaacatataagtcgagcttaagggttctt
gccaacttcgtggactcccttcctcatggaccagatatgaacctacacgctgagtacgtg
attacggttcagaacaagcaattcattggtgaagttgttcttccggaagaatcaccaata
agaggagttgttggtcgtccagcttcaacaaagcaagttgcgaaatgctctgcagcattc
gagacctgtctccttctcatcaaaggaaagtacctcgacgagtttttgctcccaatatat
acaaaacaactacccgtgatgcgcaatgccttactggcagttgactccaaaaaacgggaa
aagtacgacatgagaactaaaccaaagctatggtcctctggagaaatagccgatgaactt
ttcgtgtcggttctacgactcaatagcccagaatctctcggccgccagtcacagcctctc
gttcttcttgccagatcacccatgccagctcttccttcattcccccttcactttggtggt
ggaaaacactcctatgttcaatgtaacccgctttccaagccgctcaaggtgtcttcagaa
ctactcacgcaaatcaactcgtttacgctgtgcgtgttcgaagatattttcagtaaaccc
ttcgagtccgatacctcgaaaatgccttatttcctggcacccctgaaggaagatggtatt
ttaaaccatgacggagatccttccaacatattagactgcgaaatcctcacagaagtgcac
caatatcagcttcaattccaaactaaaagagtgaatgaattcaaattctggcagaatgaa
ccggatgaattcttcaaagacaagtacattgttgatgtttacgagggctcacgcaagttc
tggtgcaaaggagtcgctcctcagtacaaacctctcgatccggtcccagataattgtgcc
cctcggaaacgtgacaaacaaaaaaaggcggaaaatattatggaatacagtaagagtctg
tggaagaaacatcaggtaaccctcgatcccaatcagcgagttttcgaggcggaacttatc
ccgttgaatcgaaatatgctggatgagagggagacaacggagaagaaaacggcgacacgt
tgctttcttattttcgagattctcaaaatatctgccctacctgctaaagtcgtctcgatg
gcctatttgtttccctccatcatccaccgaatcgaagcatacctcgtcgctcttgaggcc
tgtgagctgcttaagttgaatattcgtcccgatcttgctttagaggctgttactaaggat
tctgataactccggcgatcatgatgagaagaagatcaattttcagcacggcatgggcaat
aactatgagcgattagagtttctaggagattgctttttgaagatggcaacctcgatctct
ttatacggtacccatcccgatcatgatgaatatgcgtaccacgtcgaccgcatgatgttg
atttgcaacaaaaacctatgcagcaatgcaatcaaactcagactctacgaatacatacga
tctcaaacgttcagtcgtgatgcttggtatcctgaggggttagtactgaaagcggaaaga
agggggaaaaagatcagtgtaataaagagccacgcgcttggggataagacaatagcagat
gtatgcgaggctctcatcggtgcagctctactgtctacaaatgatcctaaaaatatggac
aacgcagtcagagccgtcactgaacttgtttgtagcgagaatcatagcgtcacttcatgg
tccgactattacaagctttatcgaaaaccagagttccaaacgaaggttgcaactgaaatg
caacgagaccttgcccgacaagtcgagcacgcgcatccttaccactttcgctggccacga
ctgctccgatcggcgtttatccacccttcttacccatattcttacgagaaaatccctagc
tatcagcgtctagagtttctcggggacgctctcttagatatggcttgtatcaactttctg
tttcatcaatatcctggaaaggaccctcagtggctcaccgagcataagatggcaatggtg
tcaaatcagtttttgggttgtctctgcgtcgagcttggtttccatacgcatttactgatc
ttcaatactgcctttcaaaaacagatcagtgactatgttacggaaatcaccgaagccaaa
acccaggcacaggatgaggcacaacgtgctggcaaagctcgtgaggattattctccggac
tactggatctctgttcggccgccgccaaagtgcttgccagatattgtagaagcctacgtc
ggggccatgtttgttgactctgagtacaactactcggaagtagaaggatttttcgatgct
cacgtcaaatggtacttcaaggatatgagtatctacgacacctacgccaataagcagccc
accacctttttgactaattttctccaggtcagcatgggctgtatggactgggctattatt
ggaaaagacataccttctattgatgggagcaagccaaagactgcggcagttgtcatcgtt
catgagacagttgttgcggagggccgagccgagagtggtcgctatgctaaagttgcagca
gcaaagaaggctctggagattttgaagggacttcctacgagggatttcagggcaaagtac
agatgtgtttgtaaaccagctgacatagaggaggtgcgggcgatcggtgacttggactta
cacggtacggcaatctga
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integrated database retrieval system
