KEGG   Glarea lozoyensis: GLAREA_10998
Entry
GLAREA_10998      CDS       T04883                                 
Name
(RefSeq) RING/U-box
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
glz  Glarea lozoyensis
Pathway
glz03022  Basal transcription factors
glz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:glz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    GLAREA_10998
  09124 Replication and repair
   03420 Nucleotide excision repair
    GLAREA_10998
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:glz03021]
    GLAREA_10998
   03400 DNA repair and recombination proteins [BR:glz03400]
    GLAREA_10998
Transcription machinery [BR:glz03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     GLAREA_10998
DNA repair and recombination proteins [BR:glz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     GLAREA_10998
SSDB
Motif
Pfam: MAT1 zf-C3HC4_5 zf-C3HC4 zf-RING_16 zf-C3HC4_2 zf-RING_2 zf-RING_4 DUF6226 DUF3797 zf-RING_5
Other DBs
NCBI-GeneID: 19470040
NCBI-ProteinID: XP_008077378
UniProt: S3DDZ5
LinkDB
Position
Unknown
AA seq 366 aa
MSRLKSQSTALTDDPLNDICPVCKSNRYLNPTLQFLINPECYHKMCSTCVDRIFTSGPAS
CPVVGCGKTLRKKGFHKAFFADLKIERECDIRKRVGAVFNRREDEFESLSSWNDYLEMVE
GLIFDLVEGTMKEKAKAEETLRAHRAANAKEIEDNKRAGLEAKDVELQREREEKEAVRQR
RLAILREQEEDKLDVEKERREMLERLARGDGDANAITKHAQKVILKKSSARRNLAESNFA
DTANGSAPSNLSIRGLKKKVAPKAELAYDPFGGLDLKPARYTLQSSYENEWLDNAKNNTL
HMAGGYSMNEYYSRTMFEAFSGLGIFIGDQVVEKSLPAAPATIGTVGAAEAAGGRLRQEM
NTDDVF
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgtcgcgactaaaatcccaatccacagctctcaccgacgaccctcttaatgacatttgt
cccgtctgcaaatccaaccgctacctgaaccccaccctccaattcctcatcaacccagaa
tgctaccacaaaatgtgctcaacctgcgtagaccgcatcttcaccagcggaccagcctcc
tgtcccgtcgtcggctgcggaaagacactgcgtaaaaaggggtttcacaaagcgtttttc
gcggatctgaaaatcgaacgggaatgcgatatccggaagcgcgtgggcgcggtgtttaat
cggcgggaagacgagtttgagagtctgagcagctggaacgattacctggagatggtggag
ggcttgatattcgatttggttgaggggacgatgaaggagaaagccaaggcggaggagacg
ttgagggcgcatcgtgcggcgaacgcgaaggagattgaggataataaacgtgcggggttg
gaggcgaaggatgtggagttgcagcgggagagggaggagaaggaggcggtgcggcagagg
agacttgcgattttgagggagcaggaggaggataagttggatgtggagaaggagagacgg
gagatgttggagcggttggcgaggggggatggggatgctaatgcgattacgaaacatgcg
cagaaggttatacttaagaaatcttcggcgaggaggaatcttgctgagtcgaactttgcg
gatactgcgaatggaagtgcgccgtcgaatttgtcgattcggggacttaagaagaaagtt
gcgccaaaggcagaattggcgtatgatccatttgggggtcttgatcttaagcctgcgcgg
tacacgctacagtcttcttatgagaatgagtggttggataatgcgaagaataatacgctg
catatggctggaggatacagtatgaacgagtactattcgaggacgatgtttgaggccttc
tcaggcttgggcattttcattggtgaccaggttgttgaaaaatctctacctgctgctcca
gcgacgattggtacagttggggcggctgaagctgccggtgggagactacgacaggagatg
aacactgatgatgtcttttga

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