Glarea lozoyensis: GLAREA_10998
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Entry
GLAREA_10998 CDS
T04883
Name
(RefSeq) RING/U-box
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
glz
Glarea lozoyensis
Pathway
glz03022
Basal transcription factors
glz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GLAREA_10998
09124 Replication and repair
03420 Nucleotide excision repair
GLAREA_10998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
glz03021
]
GLAREA_10998
03400 DNA repair and recombination proteins [BR:
glz03400
]
GLAREA_10998
Transcription machinery [BR:
glz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GLAREA_10998
DNA repair and recombination proteins [BR:
glz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GLAREA_10998
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-C3HC4
zf-RING_16
zf-C3HC4_2
zf-RING_2
zf-RING_4
DUF6226
DUF3797
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
19470040
NCBI-ProteinID:
XP_008077378
UniProt:
S3DDZ5
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MSRLKSQSTALTDDPLNDICPVCKSNRYLNPTLQFLINPECYHKMCSTCVDRIFTSGPAS
CPVVGCGKTLRKKGFHKAFFADLKIERECDIRKRVGAVFNRREDEFESLSSWNDYLEMVE
GLIFDLVEGTMKEKAKAEETLRAHRAANAKEIEDNKRAGLEAKDVELQREREEKEAVRQR
RLAILREQEEDKLDVEKERREMLERLARGDGDANAITKHAQKVILKKSSARRNLAESNFA
DTANGSAPSNLSIRGLKKKVAPKAELAYDPFGGLDLKPARYTLQSSYENEWLDNAKNNTL
HMAGGYSMNEYYSRTMFEAFSGLGIFIGDQVVEKSLPAAPATIGTVGAAEAAGGRLRQEM
NTDDVF
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgactaaaatcccaatccacagctctcaccgacgaccctcttaatgacatttgt
cccgtctgcaaatccaaccgctacctgaaccccaccctccaattcctcatcaacccagaa
tgctaccacaaaatgtgctcaacctgcgtagaccgcatcttcaccagcggaccagcctcc
tgtcccgtcgtcggctgcggaaagacactgcgtaaaaaggggtttcacaaagcgtttttc
gcggatctgaaaatcgaacgggaatgcgatatccggaagcgcgtgggcgcggtgtttaat
cggcgggaagacgagtttgagagtctgagcagctggaacgattacctggagatggtggag
ggcttgatattcgatttggttgaggggacgatgaaggagaaagccaaggcggaggagacg
ttgagggcgcatcgtgcggcgaacgcgaaggagattgaggataataaacgtgcggggttg
gaggcgaaggatgtggagttgcagcgggagagggaggagaaggaggcggtgcggcagagg
agacttgcgattttgagggagcaggaggaggataagttggatgtggagaaggagagacgg
gagatgttggagcggttggcgaggggggatggggatgctaatgcgattacgaaacatgcg
cagaaggttatacttaagaaatcttcggcgaggaggaatcttgctgagtcgaactttgcg
gatactgcgaatggaagtgcgccgtcgaatttgtcgattcggggacttaagaagaaagtt
gcgccaaaggcagaattggcgtatgatccatttgggggtcttgatcttaagcctgcgcgg
tacacgctacagtcttcttatgagaatgagtggttggataatgcgaagaataatacgctg
catatggctggaggatacagtatgaacgagtactattcgaggacgatgtttgaggccttc
tcaggcttgggcattttcattggtgaccaggttgttgaaaaatctctacctgctgctcca
gcgacgattggtacagttggggcggctgaagctgccggtgggagactacgacaggagatg
aacactgatgatgtcttttga
DBGET
integrated database retrieval system