Glarea lozoyensis: GLAREA_11129
Help
Entry
GLAREA_11129 CDS
T04883
Name
(RefSeq) Ribonuclease H-like protein
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
glz
Glarea lozoyensis
Pathway
glz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLAREA_11129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_11129
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
GLAREA_11129
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
GLAREA_11129
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
19470171
NCBI-ProteinID:
XP_008077509
UniProt:
S3DCH8
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MPPQMQRFGGAPNNLPSHSHYSQYQGHAQLPPPSLGRDLGFMNANSMSNPFSVNGNALGV
GNFGNASLGMPGSTGLASQAAQMSFAGASVHQQGLPAMGHPVPRPVNKGRIREVWKGNLE
EEMGNLRNLVTRYNYIAMDTEFPGVVARPMGQFNGKSDYHYQCLRCNVDLLKIIQLGITL
FNEDGEHPPAIINPEDLPASGRRGGTIGEIPHTWQFNFKFSLQDDMYAQASIEALQQAQV
DFERLDKDGIDPFDFGALLVSSGLVCDEDVKWISFHGGYDFGYLTKLLLRLPLPDDETEF
DIFMKKFFPSVYDIKHLMKYAIRQNTMGQMTPLDSMTTEVLAKFDQRSGLEQLAEAFKVK
RQGHAHQAGSDSLLTGKCFFRMRDKIFKGEISDEHVGKVWGLGVPDYGAPPQLSTPQHYH
QQLQENSTPQQNGANGTPSTPNTGPAHLAGTPVHNTNGGGIGPLTPGGGGGVFGAFQYNN
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcctccacagatgcaacgcttcggcggcgcgccgaataacctgccgtctcattcgcat
tactcgcagtatcaaggccacgcgcagttacctcctccgtcgctcgggagagaccttggt
ttcatgaatgcaaattccatgagcaaccccttctcagtaaatggcaacgctttaggagtg
ggaaactttggaaatgccagcctcggtatgccaggtagcactgggttggcaagtcaagct
gcgcagatgagctttgcaggcgcttcggtacatcagcagggacttcctgccatggggcat
cccgtaccacggcctgttaataagggcaggatacgtgaagtttggaaaggtaatctggaa
gaagagatggggaacttgcggaatctggtgactagatacaactatattgctatggatact
gagtttccaggtgttgttgcgcggccgatgggtcaattcaacgggaagagcgattaccac
taccagtgcctgcgatgcaatgtagaccttctgaagattatccaacttgggatcactctt
tttaacgaggacggcgaacatccaccagccataataaacccagaggatctaccagcgtct
ggtcgaagggggggaacgattggagagatacctcacacatggcaattcaactttaagttc
tcgttacaggatgatatgtacgcacaggcatcgatagaggctctacagcaggcgcaggta
gactttgaaagacttgataaagacgggattgatccgtttgattttggagctctgttggtc
agctccggcttggtctgcgacgaggatgtaaaatggatatctttccatggtggttatgat
ttcgggtatcttacgaagctgctactacgactacctcttcccgacgacgaaacagagttt
gacatattcatgaagaaattctttcctagcgtttacgatatcaagcatcttatgaaatat
gctattcgccagaacacaatgggtcaaatgacgccactagactccatgaccactgaggtt
cttgcaaagtttgatcaaagatcaggactggagcagcttgcggaagcattcaaagtcaag
cgacaaggacacgcacatcaagctggatccgattcgttgctgaccggaaagtgtttcttc
agaatgagagacaagatcttcaaaggcgaaattagcgacgaacatgtaggaaaggtctgg
ggactcggcgtaccagattacggcgcccctccacaactctcaacccctcaacactatcat
caacaactacaggagaactcaacgccacagcaaaacggggcaaacggcacgcctagcacg
cctaatacgggcccagcacatctggcaggcacaccggttcataatactaatggaggaggc
atcgggcccttgactcccggaggaggaggcggcgtctttggcgcttttcagtacaacaat
aaatag
DBGET
integrated database retrieval system