Glarea lozoyensis: GLAREA_11310
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Entry
GLAREA_11310 CDS
T04883
Name
(RefSeq) Nucleic acid-binding protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
glz
Glarea lozoyensis
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
glz03009
]
GLAREA_11310
Ribosome biogenesis [BR:
glz03009
]
Eukaryotic type
90S particles
Other 90S particles
GLAREA_11310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
Spt6_S1
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_14
Suf
HAT_Syf1_CNRKL1_C
TPR_19
NRDE-2
ARM_TT21_N
Motif
Other DBs
NCBI-GeneID:
19470351
NCBI-ProteinID:
XP_008077689
UniProt:
S3DD03
LinkDB
All DBs
Position
Unknown
AA seq
1786 aa
AA seq
DB search
MAPIEKKRKTGPTNDSFARSRKPEDKDGRPSKRPRAEEERTKPSGAATKLSKVREEEVAF
PRGGASVLTPLEHKQIQIEATQDVLFEQQGAKSSRMEIDGEEGNVAAKKPKSRGKAKKDT
APAEADEQAVKIEGLSYKRLVPGSVVLGQISQINDHDIALSLPNNLTGYVPITSISDKIT
QRIEEIAAAEEQDNDQETPEDVDLSTMFSIGQYLRAYVVSTSDETTTSTATKSKRRIELS
IRPQQSNNSLSAQNVIPNNMVMAAVSSVEDHGLVMDLGLEDTTVKGFMSSKEIGKGTELS
KVQEGAVYLSMVTGLSSNGKIVKLSADTQKIANTKKLSYLSEAPTIDAFMPGTAVEILVT
DVTARGVIGKVMGMVDVTIDLIHSGAALPGKDLEKKYKLGSKIKGRVICNFPTADPPKLG
VSLLDHVIGMSLQQAVVNGEKKQPLDVLPLSAILEEVVVRKVEAGHGLFVDVGVKGLSGF
VHISRVKDGKIETLSEVSGAYKLGSTHRGRVIGYNSIDGTFLLSLEASILEQPFLNIEDL
KIGETVKGTIEKIVVNAKGVGGVLVNLAEGISGLVPEAHMADVKLLHPEKKFKEGMAVTC
RVLSTDPSKRQVRLTLKKSLVNSEAAPFVSYEDIEVGMQSPGTIINVLQAGAVVQFYGSI
RGFLPVAEMSEAYIQDPTQHFRIGQVVNVHVTKVDPETQKMTVSCKDPTTFGLAQQTALK
NLKVGEIVSALVTEKSSDDISLEIEGQSLRATLSLSHLTDGSSSKNASAFKKIRVGQKLT
DLAVLEKLESKRLVLLTNKPSLIKASKDRTLLRSIEDVKVDKIVHGFVKNITPTAAFIQF
GGGLTGLLPKSKLPKDMASLDDFGLKKFQAAQVKVISVDREQGTFVLSMTDMSEDSKASQ
QPVAGEALTGDVVNPVDESITSMQNFDIGRLTKARVVSVKDTQINVQLADNVQGRIDVSQ
VFDSWEEIKDRKKPLKKFSAKQILDVRVLGMHDARNHRFLPISHRVGKSVVFELSAKPSD
QVETTQEPLTLDKVKKGSAWIAFINNITDNCAWVNLSPNVRGRISLMEMSDDVSRLKDVE
SNFPVGSAIRARVTNVDASNNRLDLSARSQPAEKLTLQTLSEGMVLPGKVTRSTERQILV
ELADGLAGPVHLPDLADDFSQADPTKYTKNDIVRVCVVSVDLPNKRFRLSTRPSRVLDSS
LPVEDPEFTSISQLKANDVVRGFVKSVAKMGLFVNIGGNLTAFVRVSDLSDSYIKDWQSE
FEVDQLVKGKITQVDANLNQIQMSLKSSVLDKNYVAPITFADLSVGQIVTGKIRKVEDFG
VFIVLDNSMNVSGLCHQSEMADKRVHDVKKLYEEGDAVKAKVIKIDSEKKRISLGLKAKY
FDDDAADSDDESDEDGAGSEQGARLDEMDQDDDDDESEDGDGGIDLDDVESMAEEVDADS
DSDADSDVDMQDATDIPALNAGGFDWDAKVLDRVQEQSDEDSDNDGADEKPKKKKKKKSE
IKIDRTGDLDANGPQSVADFERLLLGQPDSSQLWIQYMAFQMQLSELSKAREVAERAIKS
INIREETEKMNVWIALINLESAYGSDESVDEVFKRACQYNDPQEIHERLASIHIQSGKLD
KADDLFQIIIKKFSQSPNVWYNYAHFLMTSLSSPDRARALLPRATQSLPPHTHLALTLKF
AALEFHSEAGSAERGRTMFEGLLSTFPKRLDIWNQLLDLEIQQGDKDIIRGVFERVTRTK
GIKPKGAKAWFRRWSEWEEGNGDAKSQERVKAKAEEWVRERSGGEE
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctattgaaaagaagcgcaagactggcccaaccaatgactctttcgcgcggtca
cgaaagccagaggacaaagatggacgaccatcgaaaaggcctcgcgcagaagaggaacgt
acaaaacccagcggagcagcaacgaagctgtcgaaagtaagagaggaggaagttgcattt
cctagaggaggcgcaagtgtcttgacgcccttagaacacaagcaaattcaaatcgaagcc
acgcaggatgttttgttcgagcagcagggcgcaaagtcgtctcgaatggagatagatggc
gaggagggaaatgttgccgctaaaaaaccaaaatcgcgtggaaaggccaagaaagataca
gcgccagcagaagcagacgaacaggcagtgaagattgaagggctcagttataagcgtctc
gttccaggttccgttgtgcttggtcagatatcacagatcaacgatcatgacattgctctt
tccctacccaataacttgacgggctatgtaccaatcacatccatatcagacaaaattacc
cagaggattgaagagatcgcagcggcagaggagcaggacaatgaccaagaaacccccgaa
gatgtagatctctcgactatgttttcaattggacaatatcttcgggcttatgttgtttct
actagcgacgagactacaacgtcaacagctacaaagtcgaagaggcgtatagagctttcg
atcagaccacaacaatccaataattcactttcggcgcaaaacgttattccaaacaatatg
gtaatggctgcagtctcgagtgtagaggatcatggtcttgttatggaccttggcttggaa
gacacaactgttaaaggcttcatgtcttcaaaagaaatcggaaagggaactgaactttcg
aaagtccaagagggtgctgtatacctgtctatggtcactggtttgagttcgaacgggaag
attgtcaaattatcagcggacacccaaaaaatcgccaacacgaagaaacttagttatctg
agcgaggcgccgactattgatgcttttatgccgggaacagccgtggaaatactagttacg
gatgttactgctcggggcgttattggaaaggtgatgggcatggttgatgtaacaatcgac
ttaattcattcaggcgcggctttgcccgggaaggatctggaaaagaaatacaaactggga
tctaaaatcaagggtagagttatttgcaattttcccactgcagatcctccgaaattgggc
gtttcgttgctggaccacgtaattggaatgtctttacaacaggctgttgttaacggagag
aagaaacaaccattagacgtcttgccattgtccgccatactagaggaagtcgttgttcgg
aaagtcgaagcaggacacgggttgttcgtcgatgtaggcgtgaaaggcctttctggattc
gttcatatctctagggtcaaagatggaaagatcgagacactatctgaggtttccggggca
tacaaactaggatcgactcaccgaggcagggtgattgggtacaattcaattgacgggaca
tttctcctatcccttgaagcgagtatcctcgagcaaccgttcttgaatattgaagacttg
aagattggagaaacagtcaagggcactattgaaaagatagtcgtcaacgcaaaaggtgtt
gggggagtactcgtcaatttggccgaaggaatatctggactcgtcccggaagcgcatatg
gctgatgttaaattacttcatcctgagaaaaagttcaaggaaggcatggcagtcacatgc
cgtgttttatctactgaccctagcaaacgacaggttcgactgactctcaaaaagagtctt
gtcaactccgaagcagcgccctttgtcagctacgaggatattgaggtggggatgcaaagc
cctgggaccatcattaatgttctgcaagcaggagctgtggtccaattttatggctccatt
cgcggctttttgcccgttgctgaaatgagcgaagcttatattcaagaccccacacagcat
ttccgcataggacaagtcgttaacgtacacgttacgaaagttgatccagaaacgcaaaaa
atgacggtatcctgcaaagacccgaccacgtttgggctcgctcaacagactgcattgaag
aatctgaaggtgggcgagatagtatctgcgcttgtcaccgagaagtcgagtgacgatatc
tctctagaaatcgaagggcaaagcttacgcgcgaccctttcgctttcgcatcttacagat
ggctcctcgtcaaagaatgcatcggcatttaagaagatacgagttgggcagaagttgaca
gatcttgccgttttggaaaaacttgaatcgaagcgtttagtacttttgactaacaaacca
agcctgattaaagcgtcgaaagatcgcacgcttctgagaagcatcgaggatgttaaagtg
gataaaattgttcatggatttgtgaagaacattacccctacggctgctttcatacaattt
ggaggtggccttacgggtttgttacccaagagcaagttgcccaaggatatggcctcactt
gacgactttggtttgaaaaaatttcaagcagctcaagtcaaggttatatcagtagatcga
gagcaaggaacgtttgtgctatccatgacggatatgagtgaagacagcaaagcttctcaa
caacctgttgcaggcgaagcgttaactggggatgttgtaaatccagtcgatgaaagcatc
acatcaatgcaaaattttgacattggaagacttaccaaagcgagagtcgtttccgtcaaa
gacacgcaaataaatgttcagctagctgataacgtccaaggtcgcattgatgtttctcaa
gtctttgacagctgggaagagatcaaggataggaagaagccactcaagaagttctctgcc
aagcagatactagatgttcgtgtcttgggaatgcatgatgctcggaatcacaggttcctt
ccgatcagccacagggtcggcaagtctgttgtgtttgagttatcagcgaagcctagtgat
caagtcgaaaccacacaggagcctctgactctagacaaggtcaagaaagggtctgcatgg
atcgcatttatcaacaacattaccgacaattgtgcttgggtaaatttatcacccaatgtc
cgaggacggattagcctgatggaaatgtcggacgatgtatcgcgtttaaaggatgtcgag
tcaaatttccccgtcgggtctgccatcagagcccgtgtgaccaacgttgatgcttccaat
aatcgattggacttgtctgctcgctctcaacccgcagagaaactcactctccaaacatta
agcgaaggaatggttcttcctggcaaggttacgaggtcgaccgaaagacaaatactcgtc
gaactcgctgacggattggctgggcctgttcatcttcccgatctcgccgacgacttttct
caagctgaccccaccaaatatacgaaaaatgatattgttcgtgtatgtgttgtctctgtt
gatttgccaaacaagagattccgactttcaacacgaccctctcgagtgttggattcttca
cttcccgttgaagacccagagtttacctctatctcccaattgaaggcgaacgatgttgtc
cggggcttcgtgaaaagtgtcgccaagatgggtctgtttgtaaatattggagggaatctt
acagcatttgtgcgagtatcagatctttcagattcatacattaaagactggcagtcggag
tttgaggtcgatcaactggtaaagggcaagatcacgcaagtcgacgccaatttaaatcag
atacaaatgagtctgaaatcctctgttttggacaagaactatgtcgcgccaataaccttc
gctgatttgtctgtcggtcagattgtcactggcaaaattcgtaaggtcgaggactttggc
gtgtttatcgttcttgacaattctatgaatgtcagcggcctctgtcaccagagtgaaatg
gccgataagcgtgtccatgatgtgaagaagctttatgaagaaggcgatgcagtcaaggcc
aaggtcattaagattgactcggagaaaaaacgcataagtcttgggctcaaagcaaaatac
tttgacgacgatgcggcggattcagatgatgaaagtgatgaagatggtgctggcagcgag
cagggggctcgacttgatgaaatggatcaggatgacgacgatgacgaatctgaggacggt
gatggcggtattgatcttgacgatgttgaaagcatggccgaggaagtggatgcagactct
gactctgatgcggattcggatgtcgacatgcaagatgccactgacattcccgcactcaat
gccggtgggtttgactgggatgccaaggttttggatcgtgtccaggagcaatccgacgag
gactccgataatgacggtgcagacgagaagcccaagaagaaaaagaagaagaagtccgaa
atcaaaatcgatcgaactggcgatctagatgcaaatgggccacaatccgtggcagatttc
gaaagacttcttcttggccagcctgattcttctcagttgtggatccagtatatggcattt
caaatgcaactcagcgagctcagcaaagccagagaagtggctgagcgtgcaatcaagtca
atcaatatccgggaagagacagagaagatgaatgtttggatcgctttgatcaacttggaa
agcgcatacggtagcgatgagtcggttgacgaagtattcaagcgagcctgccaatacaac
gatccacaagaaattcacgaaagactagccagcatccacatccaatctggcaagcttgat
aaagctgacgacctcttccaaatcatcatcaagaaattctcccaatcgccaaacgtctgg
tacaactacgcacacttcctaatgactagtctctcatctcccgaccgcgcacgcgctctc
ctcccacgagccacccagtcactcccaccacatacccatctcgctctaaccctcaagttc
gccgccctggaattccactccgaagccggctccgcggaacgcggacgtaccatgttcgag
ggtttactgtctaccttcccgaaacgcctcgatatctggaatcagctgctggatctggag
atccaacagggtgataaggatatcattcgtggtgtctttgagcgggtgacgaggacgaag
gggattaaaccgaagggagcgaaggcttggtttagaaggtggagtgagtgggaggagggg
aatggcgatgcgaagagtcaggagagggtcaaggctaaggcggaggagtgggttagggag
aggagtggtggagaggagtaa
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integrated database retrieval system