Glarea lozoyensis: GLAREA_11580
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Entry
GLAREA_11580 CDS
T04883
Name
(RefSeq) Pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
glz
Glarea lozoyensis
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
glz03016
]
GLAREA_11580
Enzymes [BR:
glz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
GLAREA_11580
Transfer RNA biogenesis [BR:
glz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GLAREA_11580
Prokaryotic type
GLAREA_11580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Sec31
Motif
Other DBs
NCBI-GeneID:
19470621
NCBI-ProteinID:
XP_008087914
UniProt:
S3CIA5
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MADDSVPAAPAKAGGESSSRGEGAHEAEEGVAGAGKAVEGEAMREEGVEEEVLGPMTSAA
VIRKLIWVGGNTSVDRRKRRDEKTGNGETDDVAKYHSTQFSKEEIEAEGRKPKRKVAVLI
GYAGSGYKGMQINGTEKTIEGDLFKAFVAAGAISKANADDPKKSTLVRCARTDKGVHAAG
NVISLKLIVEEDDIVQKINAALPPQIRVWGYERTNGSFSCYQSCDSRWYEYLIPTYSFLP
PHPRSFLGRKLVDSAEKKGVLDEYKSRQEDVANFWDSAEEKYIKPILDELDPEMRDAVME
SIHASEIMLDLDLPKPKKEKPAKAKPTNVSMDPATQAENEASLLNVHGDRKAHLERAIAQ
DQMKRKAEEDSVSRDQPPPKIQRISPDHTSVDTPEQKNGLAETNALATESPSVEVVASED
SNLKAVDTTSLVENAKEEVEAESTAISANEEADSTVADTTAPLEGAKQELEAESTAITTK
QDEPRRELTPLEVAIKRVKAAYITAKKAYRISEYRRQRVEEALNTYVGTCNFHNYTIQKS
FSDPSAKRVIRSFKVGKDPVYINDTEWLSLKVHGQSFMMHQIRKMVAMASMVVRCGSTAE
VIRDSYGRAPISIPKAPSLGLLLERPVFNSYNTQAVSKFNREKIDFDKYQKEMDEFKQRE
IYDRIFREEERDNQFHTFFHHIDNFKTDYFLWVTAEGVAGARQSVARSENVLPEDVYESD
EEQPDAKGEEG
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgattccgttccagctgcgccggctaaggccggtggtgaaagttcttcacgg
ggggagggggctcacgaggcagaggagggggtcgcgggcgcgggcaaggccgtggaaggg
gaggcaatgagagaggaaggggtcgaggaagaggttttggggccaatgacttcggcggcc
gtcataagaaagctgatatgggtcggggggaatacgagtgtagacagacgaaaacgacga
gacgagaagactggcaatggtgaaaccgacgatgttgccaaatatcatagcacgcaattc
agcaaggaagaaatcgaagccgagggtcgcaaaccaaaaagaaaagtcgcggtgttgatt
ggttatgcaggatcaggttataaggggatgcaaatcaacggaacagaaaagacaatcgag
ggtgatctcttcaaggcattcgtcgctgccggcgcgatttcgaaagccaatgcggatgac
ccgaaaaagtctacactggtcagatgtgcgagaacagacaaaggtgtacatgctgcaggc
aacgtaatctctctcaagcttattgtcgaggaggacgatatcgttcagaagatcaatgct
gctctaccgccccaaattagagtttgggggtatgagcgaactaacggctcattcagttgt
taccagagttgtgattccaggtggtacgagtacctcattccaacatactctttccttccg
ccgcatccgcgaagcttcctaggacgaaaattggttgactcggcagaaaagaagggggtc
ttagatgaatacaagtcgcgacaggaggatgtggccaacttttgggatagtgccgaagaa
aaatacattaagcccattcttgatgaactggatccggagatgagagatgcggttatggag
tctattcacgcctctgagatcatgctagatttagatctacccaaaccaaagaaggagaag
ccagccaaagcgaagccaacaaatgtctctatggacccggcaacgcaggcagaaaacgag
gcgtccttattaaatgttcatggagatcgtaaagcacatcttgagagggcaattgctcag
gaccagatgaagcgcaaagctgaagaggattcagtatcacgggaccagccaccaccaaaa
atacaacgaatatcgcctgatcatacgtcagttgatactcccgaacagaaaaatggactg
gcggaaacaaatgcgctggctacagagagcccatcggtagaggttgtcgcaagcgaagat
tcaaatttgaaagctgtggataccacatcccttgttgaaaatgcaaaagaagaagtcgaa
gcagagagtactgcgatttcggcgaatgaagaagcagattcgacagtggcagacacgacg
gcccctctcgaaggtgcaaaacaggaattagaagcagaaagcactgcgatcacaacgaaa
caagatgagcctaggcgcgagcttacccctctggaagtcgctatcaaaagggtcaaagct
gcatatatcaccgccaaaaaagcctaccggatatcggagtaccgccgtcaaagagttgaa
gaagcactaaacacatatgttggaacatgcaatttccataattacaccattcaaaaatct
ttctctgatccttccgctaagcgagttatacgctcatttaaggttggtaaagatcctgtt
tacattaacgatacggaatggctctctctgaaggtacatggtcagtcattcatgatgcac
caaattcgaaaaatggtcgcaatggcatcgatggtggttcgctgtggtagcactgctgag
gttattcgcgatagttatggaagagctccaatcagtattccaaaagctcccagtcttggt
ttgttgctagaacgcccggtgtttaatagctacaacacccaggctgtttcgaaattcaac
cgagagaagattgatttcgacaagtaccaaaaggagatggacgagtttaagcaaagagaa
atttatgatcggatattcagagaggaagagagagacaaccaattccacacgttcttccat
catatcgacaacttcaagaccgactactttctttgggtaacagcagaaggggtggctggt
gcgagacagagcgtcgctaggagtgaaaacgttctacccgaagatgtttacgagagcgac
gaagaacaaccagatgctaaaggtgaagaaggatga
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