Glarea lozoyensis: GLAREA_12085
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Entry
GLAREA_12085 CDS
T04883
Name
(RefSeq) WD40 repeat-like protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
glz
Glarea lozoyensis
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
glz03009
]
GLAREA_12085
Ribosome biogenesis [BR:
glz03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
GLAREA_12085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
19471126
NCBI-ProteinID:
XP_008081058
UniProt:
S3E0D1
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MLSEGFITSIRAQPKSANTAVAKDVGIYLHTLNSSHTVKSSFKKSSTHVNALAANATHIF
AAQADKAVVHVYSRERGNQEALVSFPERISCLTLAGESVVVFTGRMISTPSAHLQTVTSI
SATKLDILTGSEDSNIHVWSLPRLLALGTKEPLEPLRSLSNHRAAITSLAIGQGTNQTNI
SVSASRDNTIIVWNHHTGDLLRTLLLPSTPLCVALDPCNRAVYAGFEDGSLQMIEFFQAN
STLNPLFDPNLQTTPVQITEAPWTAPSEPGSVHCVGLSYDGTFILSGHASGKISQWDTGR
RAFSSELVDLNAPVTNLLMLSPFPSRVTARVTTVVKPKLGEVQYTFTAQLCAPPHTTDFD
RIVNSNGFPEEMLVDAVARFSTPTSSSSSGDDKLRKENEELWRVVNEQQALQKKTLDKYN
KLKANGS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgttgtccgaaggctttataacgtcgattcgtgctcaaccaaaatccgcgaacactgcg
gttgccaaagatgttggaatctacctccatacattaaattcgtcgcacacggtcaagtcc
tcgttcaaaaagagctccacacatgtgaatgctctcgcggcaaatgccactcatatattc
gcagcgcaggctgacaaagcggttgttcatgtgtactcaagggagcgagggaatcaggag
gcattggtttcgtttccagagaggatcagctgcttgaccctggcaggagagagtgtggtt
gtcttcacaggtcggatgatttcaacgccatctgctcatttgcagacagtaacatctata
agtgctacaaaattggatatcctgactggatccgaggattcgaatatacatgtctggtca
ctacctcgacttttggcattgggaacaaaggagcctctggagccgctgcgaagcttgtca
aaccatcgagctgccattacctctcttgccataggtcagggcacaaatcaaacaaacatc
agtgtttctgccagtcgagataataccatcatcgtctggaatcaccatacaggagacctg
cttcgcacgctcttgttaccttcgacacccctttgcgtcgcccttgatccatgcaatcga
gcggtgtatgcagggtttgaagacggttcgttacagatgatcgagttctttcaagcaaac
tctaccttaaacccgctgtttgacccgaatcttcagacgacgccagtacagatcaccgaa
gctccctggaccgcgccctctgaacccgggtccgtacactgcgtaggtttgagttacgac
ggcacttttattctgtctggtcacgcgtcaggaaagatatcccaatgggatacgggtcgt
cgtgctttctcttccgagcttgttgatcttaatgctcctgtcacaaatctcctaatgcta
tcgcctttcccctcgagggttactgctcgagttactactgtcgtgaagccgaagcttggt
gaggttcaatacacatttacagctcagctctgtgctccaccccacacgactgattttgat
cgaatagtcaactcaaacgggtttccagaggagatgttagtggatgcggtcgcccgattc
tcgactccgacaagttcatcttcgagtggagatgacaaattaaggaaagaaaatgaagaa
ctgtggagagttgtgaatgagcagcaagctttgcagaagaagacactggacaaatacaac
aaactcaaggctaacgggtcttga
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