Glarea lozoyensis: GLAREA_12601
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Entry
GLAREA_12601 CDS
T04883
Name
(RefSeq) Sm-like ribonucleoprotein
KO
K11097
small nuclear ribonucleoprotein E
Organism
glz
Glarea lozoyensis
Pathway
glz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLAREA_12601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_12601
03041 Spliceosome [BR:
glz03041
]
GLAREA_12601
03032 DNA replication proteins [BR:
glz03032
]
GLAREA_12601
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
GLAREA_12601
Spliceosome [BR:
glz03041
]
Complex A
U1 snRNP components
Sm proteins
GLAREA_12601
U2 snRNP components
GLAREA_12601
Complex B
U1 snRNP components
GLAREA_12601
U4/U6.U5 tri-snRNP components
GLAREA_12601
Complex C
U2 snRNP components
GLAREA_12601
DNA replication proteins [BR:
glz03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
GLAREA_12601
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
YjdM
ATP-grasp_6
Motif
Other DBs
NCBI-GeneID:
19471641
NCBI-ProteinID:
XP_008081573
UniProt:
S3DY98
LinkDB
All DBs
Position
Unknown
AA seq
95 aa
AA seq
DB search
MNRGGGGGGRKVLLPPINFIFKLLQQHSTVQIWLYEQLAIRIEGRIRGFDEFMNLVIDDA
VEVKQATKTSEESRRSLGQILLKGDNVSLIQSLQG
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaggtggtggaggcggtgggcgcaaagtccttcttcccccaatcaatttcata
ttcaagctcctgcaacagcactcgacggtacaaatctggctttacgagcagctggcgatt
cgaatcgaaggcagaattaggggtttcgacgagttcatgaacctggttatcgacgatgcg
gtggaggtaaagcaagctacaaagacgtccgaggagagcaggagatcattaggacaaatt
ttactgaagggcgataatgtatcattgattcaaagtttacaaggatga
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integrated database retrieval system