KEGG   Glarea lozoyensis: GLAREA_12601
Entry
GLAREA_12601      CDS       T04883                                 
Name
(RefSeq) Sm-like ribonucleoprotein
  KO
K11097  small nuclear ribonucleoprotein E
Organism
glz  Glarea lozoyensis
Pathway
glz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:glz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GLAREA_12601
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:glz03019]
    GLAREA_12601
   03041 Spliceosome [BR:glz03041]
    GLAREA_12601
   03032 DNA replication proteins [BR:glz03032]
    GLAREA_12601
Messenger RNA biogenesis [BR:glz03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     GLAREA_12601
Spliceosome [BR:glz03041]
 Complex A
  U1 snRNP components
   Sm proteins
    GLAREA_12601
  U2 snRNP components
    GLAREA_12601
 Complex B
  U1 snRNP components
    GLAREA_12601
  U4/U6.U5 tri-snRNP components
    GLAREA_12601
 Complex C
  U2 snRNP components
    GLAREA_12601
DNA replication proteins [BR:glz03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     GLAREA_12601
SSDB
Motif
Pfam: LSM Hfq YjdM ATP-grasp_6
Other DBs
NCBI-GeneID: 19471641
NCBI-ProteinID: XP_008081573
UniProt: S3DY98
LinkDB
Position
Unknown
AA seq 95 aa
MNRGGGGGGRKVLLPPINFIFKLLQQHSTVQIWLYEQLAIRIEGRIRGFDEFMNLVIDDA
VEVKQATKTSEESRRSLGQILLKGDNVSLIQSLQG
NT seq 288 nt   +upstreamnt  +downstreamnt
atgaacagaggtggtggaggcggtgggcgcaaagtccttcttcccccaatcaatttcata
ttcaagctcctgcaacagcactcgacggtacaaatctggctttacgagcagctggcgatt
cgaatcgaaggcagaattaggggtttcgacgagttcatgaacctggttatcgacgatgcg
gtggaggtaaagcaagctacaaagacgtccgaggagagcaggagatcattaggacaaatt
ttactgaagggcgataatgtatcattgattcaaagtttacaaggatga

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