Glarea lozoyensis: GLAREA_12811
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Entry
GLAREA_12811 CDS
T04883
Name
(RefSeq) hypothetical protein
KO
K18748
protein SSD1
Organism
glz
Glarea lozoyensis
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_12811
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
GLAREA_12811
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
Dis3l2_C_term
OB_Dis3
CSD2
Rrp44_CSD1
DUF5774
Motif
Other DBs
NCBI-GeneID:
19471851
NCBI-ProteinID:
XP_008082765
UniProt:
S3DUI4
LinkDB
All DBs
Position
Unknown
AA seq
1400 aa
AA seq
DB search
MEHQQNQQPPPQGGVPGPTGRRLHIAHRRSPSELTPLMSMFSSPGMEQLAIQQQIELLQQ
QQQQIQATHQQYVNMGMIPPTQHLAPGGGYNPLQPQMQNMSPQTGFQFPNQMQQQPQINA
PMGAPTQPLSHRRNQSALPNMGMGPPPAPSSGASGSAFGDFGGHNRENSSSNRGGRGGGP
PGGGHQRRHSLALPEAKKAAELAQQKRTTSGFQFPIPGAGGATPTESSESPAGEDNNGQG
QATGNHLTAGPSTRGRGGAHGRSQSMAVGANARGGASMRGGGSFQFPAMQTAPDAGAGGQ
QQGNEFQQKRGGGSVGHNRNSSRNFEGNWRNQPPQGQAPQDQQQPTMGNFQGQQQQQGGF
QPGHRNRGSMNQSVNSLGSFQYGQQPQLVQLPQGQMALVQQPMYPGQQLNPLQISQLQAL
QAAQMNGQVGLAGSHHAPQLSAQQQQQQRKTLFTPYLPQATLPALLGDGQLVSGILRVNK
KNRSDAYVSTQDGLLDADIFICGSKDRNRALEGDLVAVELLDVDEVWGQKREKEEKKKRK
DITDTRGGSSGGNADTSHRDNSTNGDRQTHNENGTMRRRGSLRQRPTQKKNDDVEVEGQS
LLLVEEEEVNDEQKPLYAGHIVAVVERVAGQMFSGTLGLLRPSSQATKEKQEAERQARDG
GNGRQHEQRQQDKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHMDYADRIFVACIKRWP
ITSLHPFGTLVEQLGKMGELKVETDALLRDNNFASDEFSDAVTRSVGLDDWSLAKEDETA
ISARRDFRDEKTFTIDPNGAKELDDAIHVKSEGDGKIEIGIHIADVAHFIKANSLVDREA
KKRSTAVFLMNRESAMLPPKIATEICSLTPGEERLTVSVVFKVNAHTGVVSDEDTWVGKS
IIKSSGKLSYKDVDAVLTGHVDIKLPGVEAKDIQILHAVAQKFREQRLGTDGETIAPLRL
IYQLDDENVPVEHNIFDSTPSHELIEELMHKANAYVAQKIYEGMPEKAFLRRQGPPNPRR
LQTFSDRMNKIGFEIDTTSSGSLQNSLFKVDDTNIRKGMETLLVKTMHRAKYYIAGKTPT
HLYPHYALNLPLYTHFTNPSRRYADLVVHRQLEAVLSEGKIEYNEDIETLVKTTESCNTK
KDSAQNAQEQSIHIESCREMDKKREEAGGELITEGIVIAVYDSAFDVLIPEYGFEKRVHC
DQLPLKKAEFRKTDRILELYWEKGVPSSAYVPEDERPRPGLSQRTTNAAAAAKQAAVAER
AKKEHEEAQRKQMETGTMSTDDVEALFEDDDASDVADSLAGASLAERPTQSVPPSPTKNS
LSAGGNLHRTRSDSKVPSAEPAEAKLSPKERYLKLFTLREENGEYIQDVKEMTRVPVILK
TDLTKSPPCLTIRSLNPYAL
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggagcatcaacaaaaccaacaacctccaccgcaaggaggcgtgccgggtcctaccggc
cgccgactacacattgctcatcgcaggagtccttccgagttgacaccgttgatgagcatg
ttctcgtcgccaggcatggagcaactggctattcagcagcagattgagctgcttcagcaa
cagcagcagcagattcaggctacccatcagcaatatgtcaacatgggcatgatacctccg
acacaacacctggcacctggcggaggatacaacccactacaaccacaaatgcaaaacatg
tcaccacaaacgggatttcagttccctaaccagatgcaacaacagccgcagatcaacgct
ccaatgggtgcacccacccaacccttatcacatcgccgtaatcaatcggctcttccaaac
atgggtatgggacctccacctgctccctcgtctggggcatcaggctcagcctttggagac
tttggaggacacaaccgtgagaacagttcatctaaccgcggaggtcgcgggggcggacct
ccaggcggtggacatcagcgtcgtcactccttagcgctgccagaagcgaagaaggctgct
gaactggcacagcagaaacgaaccacctctggatttcaattccctattcctggagctggt
ggtgccactcctacagagtcgagtgagagtccagctggtgaagataacaatggacaaggt
caggctactggaaaccatctcacggcaggtccatctactcgaggaagagggggcgctcat
ggcaggagccagagtatggcagtcggtgccaatgcaagaggcggggcttctatgcgtggc
ggaggctcttttcaattccctgctatgcagaccgcaccggacgctggtgcaggcgggcaa
caacaaggaaatgagttccagcagaagcgtggaggtggctctgtgggtcacaaccgcaat
tcttctcgcaatttcgagggcaactggagaaaccaaccgccacaaggtcaggcaccacag
gatcagcaacagcctactatgggcaacttccaaggccaacagcaacaacaaggtggattc
caacctggacatcgcaatcggggatctatgaaccagtccgtcaacagccttggctctttc
caatatggccaacaaccacagcttgttcaattgccccaaggccagatggctcttgtccaa
cagccaatgtaccctggacagcagttgaatccactccagatcagtcaactccaggctctg
caagccgctcaaatgaatggccaagttggtctcgcaggcagccatcatgccccccaactt
tccgcgcaacaacaacagcaacaacgcaaaacgctctttacaccatatttaccacaagct
actcttcccgcactccttggggatggccagcttgtttctggtatccttcgtgttaacaag
aagaacagaagtgatgcctacgtttctacccaggacggtctcttggatgcagatattttt
atttgcggaagcaaagatagaaatcgtgcactcgagggcgatcttgtagcggtcgaacta
cttgacgtggatgaggtatggggccagaagcgagagaaagaagagaagaagaagcgcaag
gatattaccgacaccagaggtggttcttccggtggtaatgcagatacatcccatcgcgat
aactcgaccaacggcgatagacagacccacaacgaaaatggcactatgcgcagacgtggt
agcctgagacagcgacccacacaaaagaagaatgatgatgtcgaggttgagggacagagt
ctacttttagtagaggaggaggaagttaatgatgagcaaaagccactctacgctggccac
attgtggctgtcgttgagcgtgttgctggacagatgttctctggaactctcggattgctc
cgtcctagcagtcaagctaccaaggagaagcaagaggctgagcgtcaagcacgcgatggt
ggaaatggacgtcaacatgagcaacgtcaacaagacaaaccaaagattgtctggtttaag
cctaccgacaagcgtgtgccactgattgccattccaactgagcaagcacctcgcgacttt
gtcgagaagcacatggactatgcagaccgtatattcgtcgcatgtatcaagagatggcca
atcacctctttacatccatttggtacgcttgtggagcagcttggaaagatgggtgagctc
aaagttgaaaccgatgctcttctcagagacaacaactttgcctctgacgaattttctgat
gccgtgactcgaagtgttggtctcgacgactggtcgctcgcaaaggaggacgagacagca
atcagcgcccgtcgtgacttcagagacgagaagacatttaccattgaccccaatggcgca
aaggagctcgacgatgctattcatgtcaagtctgaaggagacggaaagatcgagattggt
attcacattgccgatgtcgcacatttcatcaaggcaaactctttggtcgaccgcgaggcg
aaaaaacgatccacagccgtgttcctgatgaaccgtgaatctgctatgctccctcctaag
attgccaccgagatctgctctttgactcctggagaagagcgtctgactgtcagtgttgtt
ttcaaagtcaacgctcatactggtgttgtctccgatgaagacacctgggttggaaagtcc
ataatcaaaagttctggtaaactttcctacaaggatgtcgacgctgtcttgacaggtcat
gtcgacatcaagcttccaggggtggaagcaaaagatattcaaatacttcatgccgttgcg
caaaagttccgagaacagcgtttaggaactgatggagagacaattgctcctctcagactc
atctaccaactggatgatgagaatgtgcctgtggagcacaacatattcgattcgactcct
tcccacgagttgatcgaggaattgatgcacaaagctaacgcttatgtcgctcagaagatt
tacgaggggatgcccgaaaaggctttcctcagaagacaaggaccaccaaacccgcgaaga
cttcaaacattctcagaccgcatgaacaagattgggtttgaaatagatactacaagcagt
ggatctcttcagaacagtctgttcaaagttgacgacacaaatatccgaaagggtatggaa
actcttctcgtcaaaacgatgcacagagcgaaatactatattgctggaaagaccccaacc
cacctctatcctcactacgcgttgaacctacctctatacactcatttcacaaacccatcg
cgtcgttatgcagatctcgttgtccatcgtcaactcgaggctgtcctctctgaaggaaag
attgagtacaacgaagatattgaaactcttgtcaagacgaccgagtcctgcaataccaag
aaagattccgctcaaaacgcccaagaacagagtattcacattgagtcctgcagagaaatg
gacaagaagcgagaagaagctggcggtgaacttatcactgaaggtattgtcattgccgta
tacgattccgctttcgatgttctcatccctgagtatggctttgaaaaacgtgttcattgc
gatcaactgccattgaagaaggcagaattccgtaagactgaccgaattcttgagctttac
tgggagaagggtgtcccatcttctgcatatgttccagaagatgagcgtccacgaccaggt
ctttcccaacgcactaccaatgccgcagccgctgcaaagcaggctgcagtcgcagagcgt
gctaagaaagaacatgaagaggcccagcgcaaacaaatggagactggaacaatgtcaacc
gatgatgttgaggctctctttgaggatgacgacgcttctgatgtcgcagatagtcttgcg
ggagcttccctggctgagcgccctacccagagcgtacctccatctccaaccaagaactct
cttagcgctggtggaaacctccaccgaactcgatccgactccaaggtaccatctgcagag
ccagctgaagctaaactcagccctaaggagcgatacttgaagctcttcactctccgtgag
gagaatggagaatacattcaggatgtgaaggagatgaccagagtacctgtgatcttgaag
actgatctcaccaagagtcctccttgcctcacaatccgttcgctcaacccatatgctttg
tga
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