Glarea lozoyensis: GLAREA_12923
Help
Entry
GLAREA_12923 CDS
T04883
Name
(RefSeq) Pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
glz
Glarea lozoyensis
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
glz03016
]
GLAREA_12923
Enzymes [BR:
glz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
GLAREA_12923
Transfer RNA biogenesis [BR:
glz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GLAREA_12923
Prokaryotic type
GLAREA_12923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-GeneID:
19471963
NCBI-ProteinID:
XP_008082877
UniProt:
S3CX50
LinkDB
All DBs
Position
Unknown
AA seq
1022 aa
AA seq
DB search
MADSNGDRGPAHSSQNVNSEPPSKRQRLFQDQSTTHPKMSENSGQDAQGGIAEADIKKET
IFESKAVDTKFDPDSREAEAGILHFVNDNGLGFSGTLKQRYTDFLVHEIAPDGTVVHLTD
DKPPPFNPHTDEPAQKLDQEPSSSRFSRFGAQDVRIELAKEEAAKKTAEASADSSASTEK
PDASSNVDVTTHAASEAVTPQVDEPATTNGPTDPKQEPSTASTPDSEENRQKLNTYFDPT
LTDRIYALYEEILKKPTAKATSFEAVLTEPLERHVRSQIHADIRRIFNSRLETEAVDQGK
ISIAAARPSNPRAAAKPRAPNPRNQKGMSRGKVGWNELGGEYLHFTLYKENKDTMEVASI
LAQALKVNKNTIGHAGTKDRRAATTQRMSVPRLLAANAAKVNYGPRGLRFARIGNFKYEK
YGLELGELKGNQFTITLRDCHFGDDSSLDEESRLKLANKVVGESVRQLQEDGFLNYYGMQ
RFGTFGVGTDEIGKKILKGDFQGAVESIMSYSDETLAYALRDTPTTDQVNKDDVDRAHAI
HIFNTTGNSRNALEKLPRKFNAEASIIRTLGSQKNDHLSAIMSIARNLRLMYVHAYQSKV
WNLAVSQRWTKYGKQVVEGDLILIESRAAIEAAKRDEVDENGEVVVHAEGGDAGYTKEEI
FDRARPVSAEEVASGKYTIYDIVLPTPGWDIEYPQNDIGDFYKEYMGSDAGGNLDPANMR
RPNKDFSLSGSYRKMMAKVSDNCTFDVRSYRAETEQMVETDLELLNKLKHANKNGQYKSQ
YSGNKSNPFNEALQGKQLNDRQFNGVRGGKTAEHDALREQVVGTSAHNAWLNSADTIKAR
DTVLREAAEAEAIASGSAITLPQFTETFVKTSADEERRRTSNKGTVVHEAEKQKENVPLN
SKDSGEPADPTNSANSAKPDTNSSDTVMVEATSLEPEVVKTEPANVPTESSPLKREAAEI
SESVPSLGQPPAEQVVEDERPVRIAVILKFALQTSQYATVALRELMKQGGVKSYQAEYTS
AR
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggcggactccaatggcgacaggggtcctgctcattcgagccagaatgtgaactctgag
cctccatccaagcgtcaacgtcttttccaagatcaatcaacaacgcacccaaaaatgtca
gaaaattcgggtcaagacgcccaaggcggaattgctgaggcagacatcaaaaaagagact
atttttgaaagcaaggccgttgatacaaaatttgatccagacagtcgcgaagctgaagct
ggtattcttcattttgtcaatgataatgggttgggtttttctggaaccctaaagcaaaga
tacacggatttccttgtccacgaaattgctccggatggaactgtcgttcaccttacagac
gacaaaccaccgccattcaacccgcataccgatgagcctgctcaaaaactggatcaagaa
ccatcttcaagtcgcttttcaaggtttggcgctcaagacgtcaggattgaacttgctaag
gaagaggctgcaaaaaaaacggcggaggcttcagcagatagttcagcttcaacagagaaa
cccgacgcttcgtccaacgtagatgtcaccacacatgctgcttcagaagccgtgactccc
caagttgacgagcctgcgacaaccaacggaccgactgatcccaagcaagagccaagcact
gctagtactcccgacagcgaagagaatcgtcagaagcttaatacctactttgaccccacc
ttgactgatcgaatctacgctctgtacgaggagattcttaagaaacccactgccaaagca
acctcttttgaagccgttctcacagaaccacttgaacgccatgtccgaagccagattcac
gctgatatccgccgcatatttaattctcgtttggaaacggaggccgttgatcagggtaag
atcagtattgccgcagctcgcccgtcaaatcctcgagccgctgcaaaacctcgagcacct
aatcctcgaaaccaaaaaggtatgtccaggggcaaagtgggatggaatgagcttggtgga
gagtacctacattttactttgtacaaggaaaataaagatacgatggaggttgctagcata
cttgctcaagccctcaaggtcaacaagaacaccatcggacacgccggtactaaagatcgt
cgggctgctacgacacagcggatgagtgttcctcgtttacttgctgccaatgcagcaaaa
gtaaactacggtcctcgtggacttcgattcgcgcgaattggcaatttcaagtatgaaaaa
tacggcttggaactgggtgagctcaaaggaaaccaattcacaatcactcttcgagactgt
catttcggagatgattcgagccttgatgaagaatcgagattaaaactagcgaacaaagtt
gttggagagtcagtgcgccaacttcaagaagatggatttctcaattactacggtatgcag
cgatttggtacatttggagtcggtacagatgaaatcggcaagaagatcctcaaaggagat
ttccaaggtgctgttgagtccataatgtcatacagcgacgaaaccttggcatatgcgttg
cgcgacactcccacaactgatcaagtgaacaaagacgacgtcgaccgagctcacgctata
catatcttcaacaccactggaaatagcagaaacgcgctggaaaagctacctcgaaagttc
aacgccgaggcttccataattagaacattgggatcacagaagaacgatcacctttccgcc
ataatgtcgatcgcaaggaatctgagactcatgtatgtccacgcctatcaatctaaagtg
tggaatcttgccgtcagtcagcgctggacgaaatatggaaagcaggtcgttgaaggggac
cttatcttgatcgaatcacgcgccgcgattgaagcagctaagagagatgaggtcgacgag
aacggcgaggttgttgttcatgcagaaggaggcgatgcaggatatacaaaagaggagatt
ttcgatcgagccagacctgtatcagctgaggaggttgccagtggcaaatatacaatctat
gatatcgttttgccgacgccaggttgggacatcgagtacccacaaaatgatatcggtgat
ttctacaaggaatatatgggaagcgatgcaggaggcaatctggaccctgcaaacatgcgc
cgcccgaataaggatttcagtctcagtggaagctataggaagatgatggcgaaagtgagc
gataattgcacattcgacgtgagatcatatcgcgcagagactgaacagatggtggaaacc
gatctcgagcttctcaacaagttgaagcatgccaataagaatggccaatacaagagccag
tatagtggcaacaagtcaaatcccttcaatgaagcgctgcaagggaaacagctcaacgat
cgtcaattcaatggagttagaggcggtaaaaccgctgagcacgatgcgctgagggagcag
gtggttggcacttctgcacataacgcttggctgaactctgcagatactatcaaggcccgg
gacactgttctcagagaggctgcggaggcggaggcaattgcatctggatctgcaattact
ttaccacaatttacagaaacttttgtcaagacttctgcggatgaggaacgccgacgaacc
agtaacaagggaactgttgttcatgaagcagagaagcagaaggaaaatgtgccgttgaat
tcaaaggacagtggggaaccagcagatccgacaaactcggcaaattctgcgaagccagac
acgaatagtagtgatactgttatggttgaagccacaagcttggagcctgaagtcgtgaaa
accgagccagcaaatgtgccgaccgaatcatcaccgctaaagagagaagccgcagagata
tcagagtcagttccctcattagggcaaccaccggcagaacaggttgtcgaggatgaacgt
cccgtacggattgctgttattttgaagtttgctttgcagacgagccaatatgcaactgtt
gcgctgagagagttgatgaagcagggtggagttaagtcttaccaagcagaatacaccagt
gctcgctaa
DBGET
integrated database retrieval system
