Granulicella mallensis: AciX8_0409
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Entry
AciX8_0409 CDS
T01664
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gma
Granulicella mallensis
Pathway
gma03420
Nucleotide excision repair
gma03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AciX8_0409
03430 Mismatch repair
AciX8_0409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gma03400
]
AciX8_0409
Enzymes [BR:
gma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AciX8_0409
DNA repair and recombination proteins [BR:
gma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AciX8_0409
MMR (mismatch excision repair)
Other MMR factors
AciX8_0409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_14
ResIII
DEAD
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
AEU34764
UniProt:
G8NNH9
LinkDB
All DBs
Position
480271..483219
Genome browser
AA seq
982 aa
AA seq
DB search
MKYCGPVNSSRVPLTNDSIEGLIRATTPPLQNSKPQPDKIEIVSDLLANMNPQQREGITS
VDGPVLLLAGAGSGKTRVITHRIAYLIKERGAAPDSILAVTFTNKAAKEMAERVEKILGH
STLASPTLATFHSFCVRVLRRDIEALRVGNVGLTRSFAIYDENDQQAVVKQALKRLGIDD
KALKPRVALGRISWAKNHMIDPQEYFLASTNPMEEKIAHIFEIYKKELAKANALDFDDLL
LETVRLLKSSSEVRERYNRKYKYLLIDEYQDTNRPQYELMKLLGRHGNVCVVGDEDQSIY
SWRGADIRNILEFEKDFPDVRTIRLEQNYRSTQVILEGASAVVAQNTQRKGKNLWTAREG
GSMIGYYEAPDGENEALFIADRIKKYLKEAGASEEEPRCAVLYRTNSQSRLVEEALRRYQ
IQYHMVGGFSFYDRSEVKDILSYLKLVQNPHDSVALGRVVNSPPRGIGKTTMDTLERMAL
TVGMSSWDAIARASEEKLLPARALTALNSFRKLIEDARAMLGPDFAAALTADAAGSELAT
EDTQLEDGDTSFDPAATASADSDTNFDFGFATEEGTPSTIAANDANTSFDTSFNFDFDFG
PSEEISTVAPENAADFNPFAPVPLKLSASDTIKERLRQQNAEAPQAEDAPAPFRKLGDPA
TLPELIKFLNERSGYIRALEDEATPESFSRIENLKELANAAQDATSRGETLAEFLDHAAL
VSDADQYSAEARVTLMTLHAAKGLEFPLVFLTGMEEGLFPHSRSVVDPTQMEEERRLCYV
GMTRAMDTLVMTRARYRRRYGNDSPEASMPSRFLEEVPSKLVEDLSPAAYGGAYATPYPQ
RGKRFGAGDDDFGGEQHYSYEDEDQSGGRGGSSAKSYASERFGGAKRGTGSGPLDNTAAF
FGKGGAGFKPSGLQFGLRPKPGSDAPAGRTGMGKGARVRHPKYGEGVIFAREGDGEDAKL
TVQFSSHGMKKLVEKFAQLERL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgaaatattgcggcccagtgaattcctcaagggtgcctctaacgaacgattcaatagag
ggtctaattcgagcgacaaccccacccctgcaaaactcaaaaccccagccagataaaata
gagattgtgtccgatcttctcgccaatatgaatccgcaacagcgcgaagggatcacctcg
gttgatgggcccgtactgctgctcgcaggcgcaggttcgggtaagacgagggttatcact
caccgcattgcctacttaatcaaggagcgcggagccgcgcccgacagcattcttgccgtc
accttcaccaacaaggccgccaaagagatggccgagcgcgtcgagaagatcctcggccac
tccacgcttgcctcaccgaccctcgcaacgttccacagcttctgcgtgcgcgtactgcgc
cgcgatatcgaagcactgcgcgtgggcaacgttggcctcacacgttccttcgccatctac
gacgagaacgatcaacaggccgtggtgaagcaggcgctcaaacgcctgggcatcgatgac
aaggccttgaagccgcgcgtggcgctgggccgcatctcctgggccaagaaccacatgatc
gacccgcaggagtacttcctggcctccaccaatccgatggaggagaagattgcgcatatc
ttcgagatctacaagaaggaactcgccaaggccaacgcgctcgacttcgacgatctgctg
cttgagaccgtgcgtctgctcaagtcgtctagcgaggtgcgcgagcgctacaaccgcaag
tacaagtacctgctgatcgacgaataccaggacaccaaccgcccacagtatgagttgatg
aagctgctcggccgccacggcaacgtgtgcgtcgtcggtgatgaagaccagtcgatctac
tcgtggcgtggcgcggacattcgcaacatcctcgagttcgaaaaagattttcctgacgtc
cgcaccatccggttggagcagaactaccgctccacccaggtgattctcgaaggtgcaagc
gcggtcgtcgcgcagaacacgcagcgcaagggcaagaatctctggacggcccgcgagggc
ggctcgatgatcggctactacgaggccccggacggcgagaacgaagcgctattcatcgcc
gaccgcatcaagaagtacctcaaagaagccggcgcgagcgaagaggagcctcgctgtgcg
gtgctgtatcgcaccaactcgcagtcgcgactggtggaagaggcgttgcgccgctatcag
attcagtaccacatggtcggaggcttcagcttctacgaccgctctgaagtaaaggacatc
ctcagctacctgaagctggtgcagaatccgcatgactcagtagctctcggccgcgtcgtg
aactcaccgccgcgcggcatcggcaagaccacgatggacacgctcgagcgcatggcgctg
acggtgggcatgagcagctgggatgccatcgcgcgagcctccgaggagaagcttttgccg
gcacgagcgctgacagcgctcaacagctttcgcaagctgatcgaagacgccagggcgatg
cttggcccggactttgctgcagcccttaccgcggatgctgcaggctcagagctcgcgacg
gaggacacacaactggaggacggagacacaagcttcgatccagccgcaacagcctctgcc
gacagcgacaccaacttcgactttggctttgccaccgaggagggaacgccgtccactatc
gcagccaacgacgcgaacaccagcttcgatacaagcttcaacttcgacttcgactttggt
cccagcgaagagatcagcacggtcgccccggagaacgctgccgacttcaatccgtttgct
cccgttccgctcaagctctctgcgagcgacacgatcaaggaacgcctgcgtcagcagaac
gccgaagccccgcaggcggaggacgcacccgcgcccttccgcaagcttggcgatccggcc
acgctgcccgagctcatcaagttcctcaacgagcgctcgggctacatccgcgccctcgaa
gacgaagccacgcccgagagcttctcgcgcatcgagaacctgaaggaactcgccaacgcc
gcgcaggatgcaacgtcgcgtggcgagaccctggccgagttcctggaccacgccgcgctg
gtctcggacgccgaccagtactccgccgaggctcgcgtgaccctgatgacgctgcatgcg
gccaagggcctggagtttccgctggtctttctcaccggcatggaggaggggctcttcccg
cactcgcgttcggtcgtcgacccgacgcagatggaagaggagcgccggctctgctacgtg
ggcatgacccgcgcgatggacacgctggtcatgacgcgggcacgctatcgccgccgctac
ggcaacgactcgccggaagcctcaatgccgtcgcgcttcctcgaagaagtgccctcgaag
ctggtcgaagacctctctccggcggcctacggtggagcctatgcaacgccctatcctcaa
cgcggcaaacgctttggggcaggggacgacgattttggcggcgagcagcactatagctac
gaggatgaagaccaatcaggcggccgcggtggttcgtctgcgaagtcctatgcctccgaa
cgctttggcggcgcaaaacgaggcaccggcagcggcccgctggacaacaccgcagccttc
ttcggcaagggtggagcgggctttaaaccgagcggattgcagttcggattacggcccaaa
cccgggtccgatgcccccgctggacgcaccggaatgggcaaaggagcccgtgtgcgccac
cccaagtatggggagggtgtcatctttgcccgcgaaggcgatggggaagatgccaagctt
acagtacaatttagtagccacggtatgaaaaagctggtcgagaagttcgcccagctcgag
cgattgtaa
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integrated database retrieval system
