Granulicella mallensis: AciX8_0789
Help
Entry
AciX8_0789 CDS
T01664
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
gma
Granulicella mallensis
Pathway
gma03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AciX8_0789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gma03021
]
AciX8_0789
03400 DNA repair and recombination proteins [BR:
gma03400
]
AciX8_0789
Enzymes [BR:
gma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AciX8_0789
Transcription machinery [BR:
gma03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AciX8_0789
DNA repair and recombination proteins [BR:
gma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AciX8_0789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Activator-TraM
DUF7489
Motif
Other DBs
NCBI-ProteinID:
AEU35138
UniProt:
G8NSN9
LinkDB
All DBs
Position
907861..912051
Genome browser
AA seq
1396 aa
AA seq
DB search
MFRSSPFELTGPITDFDSIKIQLASPEKIRSWSHGEVTKPETINYRTFKPERDGLFCARI
FGPITDWECLCGKYKRMKHRGVICDKCGVEVTLSKVRRERLGHIELASPCSHVWFFKGLP
SRIGHLLDISLRELEAVLYFESYVVVDPGDAPVKEREVIKDENRFRELDQQYRPSGFKAM
MGAEAIKELLKRVEITELAIELRERMKTETSLQKKLKYAKRLKVVEAFRRSDNKPQWMIL
DVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKKLMDLHAPEVIVRNEKRML
QEAVDALFDNGRRGRVLRGANNRPLKSLSDTLKGKQGRFRQNLLGKRVDYSGRSVIVVGP
ELKLHQCGLPKKMALELFKPFIYHRLEQTGHCTTIKQAKEMVEQQDPIVWDILEEVIKDH
PVLLNRAPTLHRLGIQAFEPVLVEGKAIKIHPLVCTAFNADFDGDQMAVHIPLSPEAQIE
ASVLMLASHNILSPASGQPITVPTQDLVLGLYYLTKAKVGAQGEGRVFANIEEVLMALEA
KQVETLTPIRLRYTGPVLDMTTAYDDQDLTHTEPVEFTRQFINTTVGRAILNDRLPEGMP
YVNGLLKKKGIGQLINYLYLNLGLEVTVHALDRIKELGFQYATKSGLSVGLDDMVIPDSK
YTVVHEAEKQVIAMQQQYLDGSITNLERSNKVTQMWSGVTERVADDMFNNMKRADKEGAM
NPIYIMADSGARGSKQQIRQLSGMRGLMAKPSGEIIETPITANFREGLTVLQYFISTHGA
RKGLADTALKTADSGYLTRRLVDVAQDVIISELDCGTVEGIYVMPIIEAGETIEPLRDRI
IGRVSLERLKDFEGKTIVEINEEIDEDKASAVQAAGIERVKIRSVLTCESKRGCCILCYG
RNLGSGKMVEMGEAVGVIAAQSIGEPGTQLTMRTFHIGGTASRVQDASHLEAKNAGKVHF
INLVTVRSKDGGLVAFNRNGSIAIIDEKGREKERYAIVYGAKLKVEDGTQVKLGDVIGEW
DPYTFSILTEIAGTVQFKDLQEGVTLNEEIDEVTGLSRLVVGDSSDEKRQPAIIIKSAKG
NKRYLMPSRAHLMLQDGDEVTPGDILAKIPRETTRTKDITGGLPRVVELFEARKPRDPAI
ISKIDGVVRFGDVSKGQRKVYVTADNGQEEEYSVPRGVYVNVQEGERLRAGDALIDGPRN
PHDILEVLGERELQQYLVNEIQEVYRLQGVSISDKHIETIVRQMLRWVKIEEVGDSNFLL
EQQIDRFRFNAENQRVLMEGGRPAIGRPLLLGITKASLSTDSFISAASFQETTRVLTEAS
INGSVDTLRGLKENVIVGRLIPAGTGMAYYRNVQLSPELEEAAAQVQQEVTAAIEAEERE
LEQMRMEGEQEELAAE
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctccagcccttttgaactaaccggaccgatcaccgacttcgactccatcaag
atccagctcgccagccccgagaagatccgctcatggtcgcacggtgaagtcaccaagcct
gaaaccatcaactaccgcacgttcaagcccgaacgtgacggcctcttctgcgcgcgcatc
tttggaccgatcaccgactgggagtgcctctgcggcaagtacaagcgcatgaagcaccgc
ggcgtgatctgcgacaagtgcggcgttgaagtcactctgtccaaggtccgccgtgagcgg
cttggccacatcgagctcgcttcgccctgctcgcacgtctggttcttcaagggcctgccg
tcgcgtatcggccacctgctcgacatctcgctgcgtgagctcgaagccgtgttgtacttc
gagtcctacgtcgtcgtcgatccaggcgacgcgcccgtcaaggagcgcgaggtcatcaag
gacgagaaccgcttccgcgagctcgaccagcagtatcgcccctccggcttcaaggccatg
atgggtgccgaggccattaaggaactgctcaagcgcgtcgagatcacggaactcgcgatc
gaactgcgcgagcgcatgaagaccgagacctcgctgcagaagaagctcaagtacgccaag
cgtctcaaggtcgttgaggccttccgccgctcggacaacaagccccagtggatgatcctc
gacgtgatccccgtgatcccgcctgagctgcgccccctggtgccgctggacggcggccgc
ttcgcgacctcggatctcaacgatctgtatcgccgcgtgatcaaccgtaacaaccgcctc
aagaagctcatggacctccatgcgcctgaggtcatcgtgcgcaacgaaaagcgcatgctg
caggaggccgtcgacgctctgttcgataacggccgccgtggccgcgtgctgcgcggtgcg
aacaaccgtccgctcaagtcgctctccgacaccctcaagggcaagcagggccgcttccgt
cagaacctgctcggcaagcgcgtcgattactcgggccgttccgtaatcgtcgtcggtccc
gaactcaagctgcaccagtgcggcctgcccaagaagatggcgctcgagctcttcaagccg
ttcatctatcaccgtctcgaacagaccggccactgcacgaccatcaagcaagcgaaggaa
atggtcgaacagcaggacccgatcgtctgggacatcctcgaagaggtcatcaaggatcac
ccggtccttctgaaccgcgcaccgaccctccatcgtctgggcatccaggcgtttgagccg
gtgctcgtcgaaggcaaggcgatcaagatccacccgctcgtctgcaccgccttcaacgcg
gacttcgacggcgatcagatggctgtgcatatcccgctctcgcccgaagcccagattgag
gcctcggtcctgatgctggcttcgcacaacatcctctcgccggccagtggtcagccgatc
acggtgccgacgcaggatctcgtgctcggtctctactacctgacgaaggccaaggtcggc
gctcagggtgaaggccgcgtgttcgccaatatcgaagaagtgctgatggccctcgaagcc
aagcaggtagagacgctgacgcccattcgtctgcgctacaccggccctgtgctcgacatg
accaccgcctacgacgatcaggacctcacgcacaccgagccggttgagttcaccaggcag
ttcatcaacacgaccgtcggccgcgccatcctgaacgaccgtctgccggagggcatgccc
tacgtcaacggcctgctcaagaagaagggcatcggccagctgatcaactacctgtacctg
aacctcggtctcgaggttacggtgcatgctctcgatcgcatcaaggaactgggcttccag
tacgcgaccaagtccggcctctcggtcgggttggacgacatggtcattccggattcgaag
tacaccgttgtgcatgaggctgagaagcaggtcatcgcgatgcagcagcagtatctcgac
ggttcgatcacgaacctggagcggtctaataaagttacccagatgtggtctggcgttacc
gagcgtgttgccgacgacatgttcaacaacatgaagcgcgcggacaaggaaggagccatg
aacccgatctacatcatggccgactccggtgctcgtggttcgaagcagcagattcgtcag
ctctccggtatgcgcggactgatggccaagccctcgggcgaaatcatcgagacccccatc
acggcgaacttccgtgaaggcctcaccgtacttcagtacttcatctcgacgcacggcgct
cgtaagggcctggcggataccgcgctcaagacggccgactcgggttacctcacgcgtcgt
ctggtcgacgtcgcgcaggatgtgatcatctccgagctcgactgcggtacggtcgaaggc
atctacgtgatgccgatcatcgaagccggcgagaccatcgagccattgcgcgaccgtatc
atcggccgcgtctcgctcgagcgcctcaaggacttcgaaggcaagaccatcgtcgagatc
aacgaagagatcgacgaggacaaggcttccgcggttcaggcagcgggtatcgagcgcgtc
aagattcgctcggttctcacctgcgagtccaagcgcggttgctgcatcctctgctacggt
cgtaacctcggttcgggcaagatggtcgagatgggtgaagccgtcggtgtcatcgcggcg
cagtccatcggcgagcctggaactcagctcaccatgcgtaccttccacatcggcggaaca
gcgtcgcgtgtgcaggatgcttcgcacctcgaagccaagaacgccggcaaggtccacttc
atcaacctcgtcactgtccgttccaaggatggcggcctggtggcgttcaaccgtaacggt
tcgatcgcgatcatcgatgagaagggccgtgagaaggagcgctacgcgatcgtctacggc
gcaaagctgaaggtcgaagacggaacgcaggtcaagctcggcgacgtcatcggcgagtgg
gacccctacacgttctccatcctcacggagatcgccggcacggtccagttcaaggatctg
caggaaggtgtcacgctgaacgaagagatcgacgaagtcaccgggctctcgcgcctggtg
gtcggcgactcctcggacgagaagcgccagcccgcgatcatcatcaagtccgcgaagggc
aacaagcgttacctgatgccctcacgcgcccacttgatgctgcaggacggcgatgaagtc
acccccggtgacatcctcgcgaagatcccgcgtgaaacgactcgtacgaaggacatcacg
ggcggtctgccgcgcgtggtcgaactcttcgaggcccgcaagccccgcgatccggcgatc
atctccaagatcgacggcgtggtccgcttcggcgatgtttccaagggtcagcgcaaggtc
tacgtcacggcggacaacggccaggaagaggagtacagcgttcctcgcggtgtctacgtc
aacgtgcaggaaggtgaacgcctgcgcgccggcgacgctctgatcgacggcccccgcaac
ccgcacgacatcctcgaggtgttgggcgagcgcgagctgcagcagtatctcgtcaacgag
atccaggaagtctatcgtctgcagggcgtgtccatctcggacaagcacatcgagacgatc
gtccgccagatgctgcgttgggtcaagatcgaagaggttggcgacagcaacttccttctg
gaacagcagatcgaccgcttccgcttcaacgccgagaatcagcgcgtgctgatggaaggt
ggccgtccggccatcggtcgtccgctgctgctgggcatcacgaaggcgtcgctctcgacc
gatagcttcatctcggccgcgagcttccaggagaccacccgcgtcctcaccgaagccagc
atcaacggctcggtagacacgctgcgcggcctcaaggaaaacgtcatcgtcggccgcttg
atccccgccggtacgggcatggcatactaccgcaacgttcagctctctccggagctggaa
gaagcggcagcccaggtccagcaggaagtcactgcggcgatcgaagccgaagagcgcgag
ctcgagcagatgcgcatggaaggcgaacaggaagaactggccgccgaatag
DBGET
integrated database retrieval system
