Granulicella mallensis: AciX8_1198
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Entry
AciX8_1198 CDS
T01664
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
gma
Granulicella mallensis
Pathway
gma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AciX8_1198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gma03021
]
AciX8_1198
03019 Messenger RNA biogenesis [BR:
gma03019
]
AciX8_1198
Transcription machinery [BR:
gma03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AciX8_1198
Messenger RNA biogenesis [BR:
gma03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AciX8_1198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
ATPase_2
NACHT
AAA
OB_RNB
AAA_25
Fungal_virus_P2_C
S1CSD-TOTE-2
ResIII
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AEU35542
UniProt:
G8NX14
LinkDB
All DBs
Position
1413121..1414371
Genome browser
AA seq
416 aa
AA seq
DB search
MTISELKEKSIAELGKLARGLEIPGTSGLRKQDLIFKILQAQSEKEGHIFAEGVLEILPD
GYGFLRSPDYNYLPGPDDIYVSPSQIRKFDLKTGDTISGNVRSPHEGEKYFALVKIEAIN
FESPEETRNKILFDNLTPLYPDERIKMETVREAISGRVMDLLCPIGKGQRGLIVAPPRTG
KTVLMQSIANSITANHPEVVLIVLLIDERPEEVTDMQRSVKGEVISSTFDEPAARHVQVA
EMVIEKAKRLVEHKRDVVILLDSITRLARAYNTIVPPSGKVLSGGVDSNALQRPKRFFGA
ARNIEEGGSLTIIASALIDTGSRMDEVIFEEFKGTGNMEVILDRKLVDKRVFPAIDIQRS
GTRKEELLIPKDDLQRTWILRKVLNPLSPVEAMELLSDKLGKTRNNQEFLHNMSSL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgactatctccgaattaaaagaaaagagcattgcagaactcggcaagctcgcccgcggc
cttgagattccaggcaccagcggcctgcgcaagcaggaccttatcttcaagattcttcag
gcccagagcgaaaaagaaggccacatcttcgctgaaggcgtgctggagattctgcccgac
ggatacggcttcctccgctcgcccgactataactacctgccgggtccggacgacatctac
gtttccccgagccagatccgcaagttcgacctcaagaccggcgacacgatcagcggcaac
gtccgcagcccgcacgagggcgaaaagtacttcgccctggtcaagattgaggcgatcaac
ttcgagtcgcccgaagagacccgcaacaagattctgttcgacaacctgacgccgctctat
cccgatgaacgcatcaagatggagaccgttcgcgaagccatctcgggccgcgtcatggac
ctgctctgccccatcggcaagggccagcgtggcctgatcgtcgctccgccgcgcaccggt
aagaccgtgctgatgcagtcgatcgcgaactcgattacggccaaccacccggaggtggtg
ctgatcgttctgctgatcgacgagcgtccggaagaagtaaccgacatgcagcgctcggtg
aagggcgaggtcatctcgtcgaccttcgacgagcccgccgcacgccacgtacaggtggcc
gagatggtgatcgagaaggccaagcgtctggtcgagcacaagcgcgacgtagtgatcctg
ctggattcgattacgcgtctggcgcgtgcctacaacacgatcgttccgccgagcggcaag
gtgctctcgggcggtgtcgattcgaacgcgctgcaacgcccaaagcggttcttcggcgcg
gcccgcaacatcgaagagggcggctcgctgacgatcatcgcctcggctctgatcgatacc
ggctcacgtatggacgaagtcatcttcgaagagttcaagggcacgggcaacatggaagtg
atcctggaccgcaagctggtcgacaagcgcgtgttcccggccatcgatatccagcgctcg
ggcacccgtaaggaagagctgctgatcccgaaggacgacctgcagcgcacctggattctg
cgcaaggttctcaacccgctgtcgcctgtcgaagcgatggaactgctctccgacaagctc
ggcaagacaagaaacaaccaggagttcctgcacaacatgagctcgctgtaa
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