Granulicella mallensis: AciX8_2408
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Entry
AciX8_2408 CDS
T01664
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
gma
Granulicella mallensis
Pathway
gma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AciX8_2408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gma03400
]
AciX8_2408
DNA repair and recombination proteins [BR:
gma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AciX8_2408
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AciX8_2408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_16
AAA_21
UvrA_inter
AAA_29
nSTAND1
AAA_23
AAA_33
SLFN-g3_helicase
DnaJ_CXXCXGXG
BCA_ABC_TP_C
nSTAND3
NACHT
Motif
Other DBs
NCBI-ProteinID:
AEU36725
UniProt:
G8NY51
LinkDB
All DBs
Position
complement(2912770..2915793)
Genome browser
AA seq
1007 aa
AA seq
DB search
MATPAANDKIVIRGARTHNLKSIDVDIPHNSLTVVSGVSGSGKSSLAFDTVYAEGQRRYV
ESLSAYARQFLERIEKPDVDHMDGLAPAIAIKQKNQTRNPRSTVATATEIYDYLRLLYAR
CGTVTCLHCGGIVRHDTVDEIVTRVLAQPEGTRVYALFPVVRREIKFEPMQGPSVDAEAA
AGAPVKKAPKKTAKAKKETTPVAVDVTDAIKERLGELRRRGYNRLWQASEDGEGSGRIVE
FSTPESLLELDFRAVEKRPIYVLTDRLALSIDIRSRLVDAIETGYREAGEIVFRTVPRED
DEQAETLRFSAAFECSTCHRAYREPEPRLFSFNNPFGACPRCQGFGNTIDFDPGLIIPDK
SKTLDEGAIDPWTKPKYRAHHGEMKRAAKTAGIPTDVPWYDLTEAQQRFIEDGQGSWSGI
RGFFADLERKKYKLHVRVFLSRYRGYATCPDCRGQRLRAEARAVLIEGRNICEVSALTIT
AAEEFFDGLKLTPAQTEIAGKILEEVRQRVHFLEQVGLEYLTLDRLSSTLSGGESQRIQL
ATSLGSRLVGALYVLDEPSIGLHARDTAKLVTIMEELRDLGNTILVVEHDPDVIRSADYL
LDLGPGAGELGGRLLAAGTVDEVRDNPASLTGKYLSGRAKIAIPKHRREPGREKLLLKGA
RIHNLRGVDLEVPLGLLCCVTGVSGSGKSTIVHQVLYRALMQALGQTEGGDPAHLYRELS
GTQYLNDVVLVDQSPIGRTPRSNPVTYIKAFDAIRELFAAQPDSKRKGLSAGSFSFNVPG
GRCDVCEGDGTVTVEMQFLADVELPCEECNGTRYKASLLEVKYKGKNIHDVLGMTVKEAL
VYFAGHPKIVDKLAVLDEVGLGYVRLGQSATTLSGGEAQRVKLAQHLASARSGASGGAGG
VKSEAKRVASRILYILDEPTTGLHFEDVATLLSAFRKLIDGGGSLLVIEHNLDVIKSADW
VIDMGPEGGSGGGHVVATGTPEEIVKVTGSHTGKWLATVLGDGNERA
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaccggcagctaacgacaagatcgtcattcgcggtgcgcgaacgcacaatctg
aagagcatcgacgtcgatattccgcataactcgctgaccgtggtcagcggcgtctccggc
tcgggcaaatcctcgctcgcgttcgacacggtgtatgccgaaggtcagcgccgctatgtc
gaaagcctgtcggcctatgctcgtcagtttcttgaacgcatcgaaaagcccgacgtcgac
cacatggacggcctcgctccggcgattgcgatcaagcagaagaaccagactcgcaatcct
cgctccacggtagccactgcgaccgagatctatgactatctgcgcctgctctatgcccgc
tgcggaacggtaacgtgcctgcactgcggcggcatcgttcgccacgacacggtggatgag
atcgtaacccgcgtactcgcacagccggaaggcacacgcgtctatgcactcttccctgtc
gtgcgacgcgagatcaagttcgagcccatgcaggggccttctgtagatgccgaagccgct
gctggagcgcctgtaaagaaggctccaaagaaaacagccaaggcaaagaaagaaaccaca
cccgtcgcggtcgatgtaactgatgccatcaaggagcggctgggagagcttcgccgccgt
ggctacaaccggctctggcaggcctctgaagatggtgaaggttccggtcgtatcgttgag
ttctctacccccgaatcgctgctggaactcgatttccgtgctgtagaaaagcggccgatc
tacgtgctcacggaccggctcgcattgtcgatcgacattcgcagccgcctggtcgatgcc
atcgagacgggttatcgcgaggccggcgagatcgtcttccgcaccgttccgcgcgaggac
gacgagcaggccgagacactgcggttctcagcagcattcgagtgctccacctgccatcgc
gcctatcgcgagccggagccgagactgttcagcttcaacaacccgttcggcgcgtgcccg
cgttgccagggtttcggcaacaccatcgacttcgatcccgggctcatcattcccgacaag
tcgaagaccctcgatgaaggtgcgatcgatccgtggacgaagccgaagtatcgcgcccac
cacggagagatgaagcgcgcggctaagaccgccggcattccgaccgacgtgccgtggtac
gacctgaccgaggcacagcagcgcttcatcgaagacggacaaggcagttggtccggcatc
cgcggcttcttcgccgacctcgaacgcaagaagtacaagctgcatgtgcgcgtcttcctg
tcgcgctatcgcggctacgccacctgccctgattgccggggccagcgtctccgcgccgaa
gctcgtgccgtgctgatcgaaggccggaatatctgtgaagtcagcgctctgacgatcaca
gctgccgaagagttctttgacgggttgaagctcacgcctgcacagactgagatcgcagga
aagatcctcgaagaggtgcgccagcgagtgcactttctcgagcaggtcgggctggagtac
ctgacgctcgaccgcctgagctccaccttgagcggcggcgagtcgcagcgcattcaactc
gcgacgagcctgggttcgcggctggtcggtgcactctatgtgctcgacgagccctccatc
ggcctgcatgcacgcgataccgcgaagctcgtcacgatcatggaagagctccgcgacctc
ggcaatacgatcctcgtcgtcgagcacgatcccgacgtcattcgctccgccgactacctg
ctggatcttggaccgggcgccggcgagcttggcggtcgattgctcgcggcaggaaccgtt
gacgaggttcgcgacaatccggcatcgctaacaggcaagtatttgagcggccgcgcgaag
atcgccataccgaagcatcgccgtgaaccgggccgcgagaagctgctgctcaagggcgcg
cgcattcataacctgcgcggcgtagacctcgaggtcccgctcggcctgttgtgctgtgtg
acgggcgtctccggctcgggcaagtcgaccatcgtgcatcaggtgctgtatcgcgcgctg
atgcaggcgctaggacaaaccgaaggcggcgacccggcgcatctctatcgcgagctttcg
ggcacgcagtacctgaacgatgtagttctggtcgatcagtcgccgattgggcgcacgccc
cgctcgaatcccgtgacgtacatcaaggccttcgacgccatccgcgaactctttgcggca
cagcctgattccaaacgcaaagggctgtcggcaggctccttctccttcaacgtccccggc
ggacgctgcgatgtctgcgaaggtgacggcaccgtcacggtcgaaatgcagttccttgcc
gacgtcgagcttccctgcgaggagtgcaacggcacccgctataaggcctctctgcttgag
gtcaagtacaagggcaagaacattcacgacgtgcttggcatgacggtgaaagaggcgctc
gtgtactttgcgggccatcccaagatcgtcgacaagctcgcggtgctggatgaagttggc
ctgggctatgtgcggctcggccagagcgccacgacgctcagcggtggcgaggcgcaacgc
gtgaagctggcacagcatctcgcctcggcgcgttccggagcctccggcggtgcaggtggc
gtcaagagcgaagccaagcgggttgcaagccgtatcctctacatcctcgatgagccgacg
actggcctgcactttgaagatgtcgccactctgctctccgcgtttcgcaagctgatcgat
ggcggtggatctctgctggtgatcgagcataatctcgatgtcatcaagagcgccgattgg
gtcatcgacatgggccctgagggcggctcgggtggcggacacgtcgtcgctaccggaacc
cccgaagagatcgtcaaagtgacgggttcgcacacaggaaagtggctcgctacggtgctg
ggcgacggaaacgagagagcatga
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