Granulicella mallensis: AciX8_2603
Help
Entry
AciX8_2603 CDS
T01664
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
gma
Granulicella mallensis
Pathway
gma03410
Base excision repair
gma03430
Mismatch repair
gma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AciX8_2603
03430 Mismatch repair
AciX8_2603
03440 Homologous recombination
AciX8_2603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gma03400
]
AciX8_2603
DNA repair and recombination proteins [BR:
gma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AciX8_2603
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AciX8_2603
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AciX8_2603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AEU36913
UniProt:
G8P0B9
LinkDB
All DBs
Position
3193543..3195372
Genome browser
AA seq
609 aa
AA seq
DB search
MSAPPLTQVTQWVVAGKVSDTAKQLERELGLPPAIACLLVCRGIETVAAARAFLAPSLDQ
LHDPSLMLGMDKAVARLRTALLLQEPVLIYGDYDVDGTVATVLLKTAAERAAAAMGVTAD
IRYHIPHRIREGYGMQELRIEAAAAEGVRLIVSVDTGIRAFAAAEEAERVGLDLIVTDHH
LPDGAEGVPRAVAVVNPNQPGCEYPYKELCGAAVAFKLAQALLESSVQQEDERLRLREKT
LPSFLKLLAIATIADAVPLTGENRVIAALGLLELRKPSQAGLKALMELSQIDTSRAISAT
DIGFRLAPRINAAGRMDIASDVVEMFLTRDPAMARTLAEKLHRLNEERRTTEAEALREIE
ERLAVMVASPEGLAACLVLDDPAWHRGVIGILASRVVDRTGRPSLVLAHEEGQAYGSGRS
VAGFHLLDALTSIDTEEDTQLFARFGGHAHAVGFSLPSSQVEDLRNRMARYAASKRTADD
EITKLDCDLELRLGEITADFLVALEQLGPFGNGNSEPVFLSYGVRLGIAPKVVKDRHLRL
TVEDPDDGSRLGGMAWGRRTDWAARAREEGWVQGSLLDLVYRLRRNWHPDFGGWELEIIA
IRSGAANNR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgcgccacccctcacccaggttacccagtgggtcgtcgcaggcaaggtttccgat
acagcaaagcagttggagcgggagctaggtcttccgccggcgatcgcctgcctgctggtt
tgccgtggaatcgaaaccgtagcggcggccagggcttttctggccccctcgctcgaccag
ctgcatgatccctccctcatgctcggcatggataaggctgtggcgcgtctccgtacggca
ctgctcctgcaggagccggtgctgatctatggcgactacgacgtcgacggcaccgtggct
accgtgctcctgaagaccgcggcagaacgggccgctgcggcgatgggcgtcaccgccgac
attcgatatcacattccccaccgcattcgcgaaggctatgggatgcaggagctacgcatc
gaggcggcagccgccgagggagtgcgtctcatcgtcagcgtcgacaccggcatccgtgcc
ttcgccgcagccgaagaggccgagcgtgtcggcctcgatctcatcgtgaccgatcatcat
ttgccggatggggcggaaggcgttccgcgagccgtcgccgtggtgaatccgaaccagccg
ggctgcgagtatccctacaaagagctctgcggagcggccgttgccttcaaactggcgcag
gccctgctcgaaagctcagtccagcaggaggacgagcgcctccgtctgcgcgagaagact
ctgccctccttcctgaagctgctggcgatcgccacgatcgcagatgccgttcccctgacc
ggggagaaccgggtcatcgcagcgctgggcctgcttgagctgcggaagccgtcgcaggca
ggactcaaggccctgatggagctgtcccagatcgatacgtcgcgcgccatctcggcgacc
gacatcgggtttcgcctggctccgcgcatcaacgccgctggccgcatggacatcgccagc
gatgtcgtggagatgtttcttacccgggacccggcgatggctcgcaccctcgctgagaag
ctgcaccgcctgaacgaggaacgccggacgaccgaagccgaagccctgcgcgagatcgag
gagcggctggccgtgatggtcgcatctcccgaaggccttgcggcctgcctggtgctggac
gatcccgcatggcaccgcggcgtgatcggaatcctggcctcccgtgtcgtcgaccgtacg
ggcaggccctctttggtgctggcgcatgaagaggggcaggcctatggctccggccggtcc
gtcgccggatttcatctgctcgatgccctcacgagcatcgataccgaagaggacacccag
ctcttcgcacgcttcggcgggcatgcacatgccgtgggtttttcgctgccctccagccag
gtggaagacctgcgcaaccgtatggccaggtatgcggcctcgaagcgcacggccgacgac
gagattacgaagttggactgcgatcttgagctgagactcggagaaatcacggctgatttt
ctggtcgccctcgaacagcttgggcccttcggcaatggaaattccgagcccgtgtttctc
agctatggggtgcggctgggcatcgcgcccaaggtcgtcaaagaccggcatctgcggctg
acggtagaggaccccgacgacggttcgcggttgggaggcatggcatggggacggcgcacc
gactgggccgctcgagcccgcgaggaaggctgggtgcaaggcagcctgctcgaccttgtc
tatcgtcttcggcgtaactggcaccctgacttcggaggatgggagttggagatcatcgct
atccgttccggtgcagccaacaacaggtag
DBGET
integrated database retrieval system
