Granulicella mallensis: AciX8_3359
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Entry
AciX8_3359 CDS
T01664
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
gma
Granulicella mallensis
Pathway
gma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AciX8_3359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gma03400
]
AciX8_3359
DNA repair and recombination proteins [BR:
gma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AciX8_3359
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AciX8_3359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_21
AAA_25
AAA_23
AAA_22
ATPase_2
ATPase
nSTAND3
cobW
BCA_ABC_TP_C
Viral_helicase1
SLFN-g3_helicase
AAA_14
NACHT
NMDAR2_C
Motif
Other DBs
NCBI-ProteinID:
AEU37657
UniProt:
G8NVI5
LinkDB
All DBs
Position
4229303..4232422
Genome browser
AA seq
1039 aa
AA seq
DB search
MSLTHINVRGARQHNLRDVSVSIPRNTLTVVTGLSGSGKSSLAFDTIYAEGQRRYVETLS
AYARQFLDQMERPDVDSIDGLSPAISIEQKTTSRSPRSTVGTITEIYDYLRLLYASVGQP
HCPNCHRPISRQSAEQIVAQIVERNRTDSPGERITVLAPVVRGRKGEFREELEALDKKGY
RVRIDGEMTEVEEGMRLEKRKNHTVEAIVDRIILKPIIDEEGQTTFDTRRLAVAVTTALQ
LANGLVLIGLQAPGGTYNETLYSSSMACPDCGINVPKLEPRSFSFNSTYGACPECHGLGS
IYDFDPAKTITDWSKPLLDGAMGPGSASQYLLKLIKLAADKYKIDLKQPFSDLSKEHQDL
LLYGPPRNEAGRTGFHGIFAWLRDTLEDTKSEGYRDYMMQYMSATECPQCHGKRLRPESL
AVTIPLADAAAHPPSTKDETEPLESSDARRDASIADFTSLSLERALLGARSMHFSGRDRL
IADRLQREIIERLEFLNAVGLGYLSLSRSAATLSGGEGQRIRLATQIGSRLRGVLYVLDE
PSIGLHQRDNQRLISALENLRDIGNTVLVVEHDEDTMRKADYILDLGPGAGKNGGFLMAS
GTPAEIMANPASVTGQYLSGKIDIVTRPTPDKAPRPVTGKWLSVEDARSHNLQNVTAHFP
LGVMTVITGVSGSGKSTLVNDILYRSLAKELYGSREEPGEHKAIHGAAQLDKVIQIDQSP
IGRTPRSNPATYTGVFTAIRDLFAMLPDSRERGYKPGRFSFNVMGGRCEACQGEGQRRIE
MNFLPDVYVLCDVCNGRRYNQETLAVKFNGYSIADILDLPIEEALPVLKDIPAVNQKLQT
LVDVGLGYIHLGQSATTLSGGEAQRMKLARELSKRQTGRTLYLLDEPTTGLHFDDVRRLL
EVLHRLTDLGNTVMIIEHNLDIIRNADYLIDMGPEGGEGGGTIVAQGPPELVAREPRSYT
GQFLARYYESAGTLTASKYLPPIELPDLQKKPAKPKWIAPEKKTGVPTASKTKPESDAQK
KLSAKKTATKKTATKKGSK
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgagccttactcacatcaacgtccgcggcgcccgccagcacaacctgcgggacgtctcc
gtctccatcccgcgcaacacgctaacggttgtcaccggcttgtccggttccggcaagagc
tcgctcgccttcgacaccatctacgccgagggccagcgccgctacgtcgaaaccctttcg
gcctacgcccgccagttcctcgaccagatggagcgccccgacgtcgactccatcgacggc
ctctcccccgccatctcgatcgagcagaagaccacctcccgctcgccgcgctccaccgtc
ggcaccatcaccgagatctacgactatctgcgcctgctctacgcctccgtaggccagccc
cactgccccaactgccaccggcccatctcgcgccagtccgccgaacagatcgtcgcccag
atcgtcgagcgcaaccgcaccgactcccccggcgagcgcatcaccgtcctcgcgccggtc
gtgcgcggacgcaaaggcgagttccgtgaagagctcgaagcgctggacaaaaagggctac
cgcgtccgcatcgacggcgagatgaccgaagtcgaagagggcatgcgcctcgaaaagcgc
aagaaccacaccgtcgaagccatcgtcgaccgcatcatcctgaagccgatcattgacgaa
gaaggccaaaccaccttcgacacccgccgcctcgccgtcgctgtaaccacggcgctgcaa
ctggccaacggactcgtgctcatcggtctgcaggcccccggcggcacttacaacgagacg
ctctacagctcctcgatggcctgccccgactgcggcatcaacgtccccaagctcgagccg
cgcagcttctcgttcaactccacctacggcgcctgcccggagtgccacggcctcggctcg
atctacgacttcgatcccgccaagaccatcaccgactggtcgaagccgctgctcgacggc
gccatgggtcccggctcggcgtcgcagtacctgctcaagctcatcaagctggcagccgac
aagtacaagatcgacctgaagcaacccttctccgacctgagcaaggagcaccaggacctg
ctgctctacggcccgccgcgcaacgaggccggtcgcaccggcttccacggcatcttcgcc
tggctgcgcgacaccctcgaagacaccaaatccgagggctatcgcgactacatgatgcag
tacatgtccgcgaccgagtgcccccagtgccacggcaaacgccttcgccccgaatctctc
gcggtcaccatcccgttggccgacgccgcggcccatcctccctccacgaaggacgagacc
gagccgcttgaaagctccgacgcacggcgcgatgcctccatcgccgacttcacctcgctc
tcgctcgaacgggctctgctcggcgcacggtccatgcacttcagcggccgcgaccgcctc
atcgccgaccgcttgcagcgcgagatcatcgagcgccttgagttcctcaacgccgtcggc
ctgggctacctctctctcagccgttctgcggcaaccctctccggcggagaaggccagcgc
atccgcctcgccacgcagatcggctcgcgtcttcgcggcgtgctctacgtgctcgatgaa
ccctcgatcggcctgcaccagcgcgacaatcagcggctcatctcagccctcgaaaacctg
cgcgacatcggcaacaccgtcctcgtcgtcgagcacgacgaagacaccatgcgcaaggcc
gactacatcctcgacctcggccccggcgcaggcaagaacggcggctttctcatggcctcc
ggcacccccgccgagatcatggcgaaccccgcatccgtcaccggccagtacctcagcggc
aagatcgatatcgtcacccgccccacgccggacaaggctccgcgtcctgtcaccggcaag
tggctctcggtcgaagacgcccgttcgcacaatctgcagaacgtcacagctcacttccct
ctcggcgtgatgaccgtcatcaccggcgtcagcggctcgggcaagagcacgctggtcaac
gacatcctgtaccgctcgctggccaaggagctttacggctcccgcgaagaacccggcgaa
cacaaggccatccacggtgcggcacagctcgacaaagtcatccagatcgaccagtcgccc
atcggccgcacgccgcgctccaatccggccacctataccggcgtctttaccgccatccgc
gatctcttcgccatgctgccggactcgcgcgaacgaggctacaagcccggccgcttcagc
ttcaacgtgatgggtggccgttgcgaggcctgccagggcgaaggccagcgccgcatcgag
atgaacttcctgcccgacgtctacgtcttgtgcgacgtctgcaacggccgccgctacaac
caggagacgctcgccgtaaagttcaacggctactccatcgccgacatcctcgacctgccc
atcgaagaagccttgcctgtcctgaaagacattccggcggtcaaccagaagctgcaaacc
ctggtggacgtcgggctcggctacattcacctcggccagtcggcgacgacgctctccggc
ggcgaggcgcagcgcatgaagctcgcgcgcgaacttagcaaacgccagaccggacgcacg
ctgtacctgctcgacgagcccaccaccggcctccacttcgacgacgtgcgccgcctgctc
gaagtgctgcatcgcctcaccgacctcggcaacaccgtcatgatcatcgagcacaacctc
gacatcatccgcaacgccgactacctcatcgacatgggcccggagggcggcgagggcggc
ggtaccatcgtcgcgcagggaccgcccgagctggtcgcccgcgaaccgcgctcttacacc
ggacagtttcttgcgcgctattatgagagcgcaggaactctaacggccagcaagtatctg
ccgccgatagagctgcccgacctgcagaagaaaccagccaaaccgaagtggatcgcaccg
gagaagaagaccggcgtaccgacagcctcaaagacaaaaccggagtcggacgcgcagaag
aaactgtccgcaaagaaaaccgccaccaaaaagaccgcaacaaaaaaaggctctaagtaa
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