Granulicella mallensis: AciX8_4805
Help
Entry
AciX8_4805 CDS
T01664
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
gma
Granulicella mallensis
Pathway
gma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AciX8_4805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gma03019
]
AciX8_4805
Enzymes [BR:
gma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AciX8_4805
Messenger RNA biogenesis [BR:
gma03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AciX8_4805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AEU39074
UniProt:
G8NYL5
LinkDB
All DBs
Position
complement(6108026..6109498)
Genome browser
AA seq
490 aa
AA seq
DB search
MSTLTLESILNPEPLEPTRTIIATDAATTVTFADFDISQPLKDRLAAAGFVTPTPVQAGA
IPPALEGDDILATASTGTGKTLSFLIPMIDRLEEISKPSTRGAKNPILALILLPTRELAM
QVLDSYFKICPTLKSDAVLVCGGLSENTQLEQLSRGPRLVVATPGRLEDFLRRRSVSLKD
VDMLVLDEVDRMLDMGFLPAIKRIVQALPKDRQTMCYSATLDASIREIVRDYVNNPVRIE
IGTTSKPSDRVELRVYTVMQDQKLAQLDKMLKEEEGTYLVFSRTKHGADRIAKKLEKAGH
LTEVIHGDRSQSQRTAALRNFTMGKARILVATDVAARGIDVSHIAHVVNYDLPNGSDDFV
HRIGRTGRAGAKGVATTFVTPLEKGDARKLERELKIKFQWHEADKNLEKEQRNQPIDMNN
AAGGDLLQMETRSWKSGDADSSSQPAPQRSRSGGGNFGRSNSGSRGPAGGGRSRSGSGGP
RNGRGASRGR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
ttgtctactcttacgcttgaatcaattttgaaccccgaacccctggaacccacgcggacc
atcatcgccaccgacgctgctactaccgtcacctttgccgacttcgacatctcacagccc
ctcaaggaccgcctcgccgccgccggtttcgttacgccgacgcccgtgcaggccggagcc
attcctcccgcgcttgaaggcgacgacatccttgctaccgcctctaccggcaccggcaag
accctcagcttcctgatccccatgatcgatcgcctcgaagagatctcgaagccctcgacc
cgtggcgcgaagaaccccatcctggccctgatcctgctgcccacgcgcgagctcgcgatg
caggtactggactcctacttcaagatctgccccacgctcaagagcgatgccgtgctggtt
tgcggtggtctctcggagaacacgcagctcgagcagctgagccgtggccctcgcctggtg
gttgcaacccccggccgcctggaagacttcctgcgccgccgttcggtttcgctcaaggac
gtcgacatgctcgtgctcgacgaagtcgaccgcatgctggacatgggctttctccctgcc
atcaagcgcatcgtgcaggccctgccgaaagatcgccagaccatgtgctactcggccacg
ctggatgccagcatccgcgagatcgttcgcgactacgtgaacaaccccgtccgcatcgag
atcggcaccacctcgaagccgagcgaccgcgttgaactccgcgtctacaccgtcatgcag
gaccagaagctcgcgcaactggacaagatgctgaaggaagaagagggcacctacctcgtc
ttctcgcgcaccaagcacggcgcggaccgcatcgccaagaagctcgagaaggccggccat
ctgaccgaggttattcatggcgatcgctcgcagtcgcagcgcaccgcagccctcagaaac
ttcacgatgggcaaggcccgcatcctggtggcgaccgacgtagccgctcgcggcatcgac
gtctcgcacatcgcgcatgtcgtgaactacgatctgcccaacggctcggacgactttgtt
caccgtatcggccgcaccggccgtgcgggtgcaaagggtgtggcgacgaccttcgtgaca
ccgctcgaaaagggcgacgcccgcaagctggagcgcgagctgaagatcaagttccagtgg
cacgaggccgataagaacctcgagaaggaacagcgcaaccagcccatcgacatgaacaac
gctgcaggcggcgatctgctgcagatggagacgcgtagctggaagagcggcgacgccgac
tccagcagccagccggcaccgcagcgttcgcgcagcggcggcgggaacttcggccgctcc
aactcgggctcacgtggccctgccggtggtggccgctcgcgtagcggtagcggcggacct
cgcaacggccgtggcgccagccgcggacgctaa
DBGET
integrated database retrieval system
