Geobacillus sp. Y4.1MC1: GY4MC1_0384
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Entry
GY4MC1_0384 CDS
T01348
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
gmc
Geobacillus sp. Y4.1MC1
Pathway
gmc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GY4MC1_0384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmc03400
]
GY4MC1_0384
DNA repair and recombination proteins [BR:
gmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GY4MC1_0384
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GY4MC1_0384
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
UFL1
AAA_19
AAA_22
AAA_7
TrwB_AAD_bind
AAA_16
AAA
AAA_30
UB2H
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ADP73226
UniProt:
A0A7U3YCQ2
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All DBs
Position
420880..422859
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AA seq
659 aa
AA seq
DB search
MGDRFELVSAYQPQGDQPQAIAKLVEGIRKGVKHQTLLGATGTGKTFTISNVIKEVNKPT
LVIAHNKTLAGQLYSELKEFFPNNAVEYFVSYYDYYQPEAYVPQTDTYIEKDAKINDEID
KLRHSATSALFERRDVIIVASVSCIYGLGSPEEYRELVVSLRVGMEIERNALLRRLVDIQ
YERNDIDFQRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIDRIREVDALTGEIIGEREH
VAIFPASHFVTREEKMRLAIENIEKELEERLRELREQGKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLALRPPGSTPYTLLDYFPDDFLIIVDESHVTLPQLRGMYNGDRARKQV
LVDHGFRLPSALDNRPLTFEEFEQKINQIIYVSATPGPYELEHSPEVVEQIIRPTGLLDP
TIDVRPIEGQIDDLIGEIQERVKRNERTLVTTLTKKMAEDLTDYLKEVGIKVAYLHSEIK
TLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNANGHVIMYADTITKSMEIAINETKRRRAIQEAYNREHGIVPQTVKKEIRDVIRATY
AAEEKETYDAKPSYSKMTKKEREQLIADLEKEMKEAAKALDFERAAQLRDIIFELKAEG
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
gtgggagaccgttttgagttagtatcagcatatcagccgcaaggagatcagccacaagcg
attgccaaactggtcgaaggcattcgcaaaggcgtgaagcaccaaacattgttaggggca
acgggaacaggaaagacgtttacgatttcgaacgtcataaaagaagtaaataaaccgacg
cttgtgattgcccacaataaaacgttggcagggcaattgtacagcgagctgaaggagttt
tttccgaacaatgccgttgaatactttgtcagctactacgattattaccagccagaggcg
tatgtgccgcagacggatacgtatattgaaaaagacgcgaagattaacgatgaaattgac
aagctgcggcactcggcgacatcggcgctgtttgagcggcgcgatgtcattattgtcgcc
agcgtatcatgcatttacgggttaggatcgccggaagaataccgcgagcttgtcgtgtcg
ctgcgcgtcggcatggaaatcgagcgcaacgctttgctgcgccgtcttgtcgatatccaa
tatgaacggaacgacattgactttcaacgcggaacgttccgggttcgcggggatgtcgtg
gagatttttcctgcttctcgggacgagcattgtattcgcgttgaattttttggcgatgaa
attgaccgcattcgcgaagtcgacgcgctgacgggagaaattatcggggagcgcgagcat
gtcgcgatttttccggcttcccacttcgtaacgcgggaagaaaaaatgcgtttagcgatc
gaaaatattgaaaaagaacttgaagagcggctgcgcgaattgcgggaacaagggaaactg
ttggaagcgcagcggctcgagcagcggacgcgctacgatttggagatgatgagggaaatg
ggcttttgctcgggaattgaaaactattcgcgccatttggcgctgcgcccgccaggatcg
acgccatatacgctgctcgattattttcctgacgattttttaattatcgtggatgaatcg
catgtgaccttgccgcagcttcgcggcatgtacaacggagaccgggcgagaaaacaagtg
cttgtcgaccacggcttccgcttgccgtctgcgcttgataaccgcccgttaacgtttgag
gaatttgagcaaaaaatcaaccaaattatttatgtctccgccactcctggcccgtatgag
ctcgaacatagcccggaagtcgtcgagcaaattattcgtccgacagggctgttggatccg
acgattgacgtccggccgattgaagggcaaatcgatgatttaatcggggaaattcaggag
cgcgtgaagcggaatgagcggacgctcgtgacgacgctgacgaaaaaaatggcggaagat
ttaacggattatttgaaagaagtcggcattaaagtcgcgtatttgcattcggaaattaaa
acacttgagcgcattgaaatcattcgtgatttgcggcttggaaaatacgatgtgctcgtc
ggaatcaacttgttgcgggaaggtctggatattccggaagtctcgcttgtcgccattttg
gacgcagataaagaaggctttttgcgctcggaacgctcattgatccaaacgatcggccgc
gcggcaagaaacgcgaatggccatgtcattatgtatgccgatacgattacgaaatcgatg
gaaattgcgattaatgaaacaaaacggcgccgtgcgattcaagaggcatataaccgtgag
cacggcattgtgccgcagacggtgaaaaaagaaatccgcgatgtcatccgcgcgacatat
gcggcggaagaaaaagaaacatacgacgcgaaaccgtcttacagcaagatgacaaagaaa
gaacgggaacagctgattgccgatttggaaaaagaaatgaaagaggcggcaaaggcgctc
gatttcgagcgggcagcccaattgcgcgatattattttcgagttaaaagcggaaggatga
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