Geobacillus sp. Y4.1MC1: GY4MC1_1092
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Entry
GY4MC1_1092 CDS
T01348
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
gmc
Geobacillus sp. Y4.1MC1
Pathway
gmc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GY4MC1_1092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmc03400
]
GY4MC1_1092
Enzymes [BR:
gmc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
GY4MC1_1092
DNA repair and recombination proteins [BR:
gmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GY4MC1_1092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ADP73904
UniProt:
A0A7U3YDN8
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All DBs
Position
1094030..1094926
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AA seq
298 aa
AA seq
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MLKIGSHVSMSGKKMLLAASEEAVSYGANTFMIYTGAPQNTRRKKIEELNIEAGLAHMKE
HGIEEIVVHAPYIINIGNTKNPDTFALGVEFLRSEIERTEAIGAKQIVLHPGAHVGAGPE
AGIRKIIEGLNEVLTREQTVQIALETMAGKGSECGRSFEELAEIIDGVTHNEKLSVCFDT
CHTHDAGYNIIDDFDGVLQEFDRIIGLDRLKVLHINDSKNPRGSRKDRHENIGFGHIGFA
ALNYIVHHPQLADIPKILETPYVGEDKNNKKPPYKHEIAMLRAQTFDEELLTKIMSEE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaatcggctcgcatgtatcgatgagcgggaaaaagatgctgcttgctgcaagc
gaagaagctgtttcctacggggcaaatacgtttatgatttacacgggcgccccgcaaaac
acaaggcgcaaaaaaattgaagagctgaacattgaagcggggcttgcccatatgaaagaa
cacggcattgaagaaatcgtcgtgcatgctccgtatatcattaatatcggcaatacgaaa
aatccagatacgttcgccctcggcgtggaatttttgcgttcggaaatcgagcggacggag
gcgattggcgcgaagcaaatcgttctccatcctggcgcgcatgtcggggcggggccggaa
gcgggaatccgcaaaattattgaagggttgaatgaagtgctgacgcgcgaacaaacggtg
caaatcgcgttagaaacaatggcgggaaaaggttcggaatgcgggcgcagctttgaggag
ctcgccgaaattattgatggcgtcacccataacgagaaattgtctgtttgttttgacacg
tgtcatacacatgatgccggctataacatcatcgatgattttgacggcgttttgcaagaa
tttgatcggatcatcggtttagaccggcttaaagtgctgcatattaacgatagcaaaaat
ccgcgcggaagccggaaagaccgacacgaaaacatcggtttcgggcatatcggctttgct
gcgttaaactacatcgttcatcatccgcagcttgccgatattccgaaaattttagagaca
ccgtatgtcggagaggataaaaacaataaaaagccgccgtacaagcacgaaatcgccatg
ctgcgcgcgcaaacattcgatgaagagttgttgacgaaaatcatgagcgaagaataa
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