Geobacillus sp. Y4.1MC1: GY4MC1_2281
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Entry
GY4MC1_2281 CDS
T01348
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
gmc
Geobacillus sp. Y4.1MC1
Brite
KEGG Orthology (KO) [BR:
gmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmc03000
]
GY4MC1_2281
Transcription factors [BR:
gmc03000
]
Prokaryotic type
Helix-turn-helix
Other families
GY4MC1_2281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
GAF
Mg_chelatase
AAA_2
PAS_9
PAS_4
AAA
MCM
PAS_8
HTH_23
HTH_30
HTH_28
HTH_29
HTH_50
PAS
AAA_22
PAS_7
HTH_7
AAA_3
HTH_1
nSTAND3
Diguanyl_cycl_sensor
Diacid_rec
AAA_16
AAA_7
RWP-RK
HTH_psq
IclR_C
HTH_22
DUF815
HTH_17
HTH_AraC
DUF1492
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
ADP75012
UniProt:
A0A7U4DLC9
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Position
complement(2265624..2267552)
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AA seq
642 aa
AA seq
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MNSRREDVKEMWKRFIFGDELDEKLSPIVKDSWIRSKKWKVDPFRPYGCIKTIDMAQYQY
LIDLSIPLMEGLYSIVKGSGFLVILCNEKGQLLKSLGDPETLEMAAQIGFVEGADWSEQT
MGTNAIGTSIVIDQPVQIFAEEHYSQICQSWTCSAAPIHDSNGSIIGVLNVSGPYEKVHP
HTLGMVVSAVKAIEYQLKLNENVEKNMMMQRFLEATTNNMKEGILIIDTEGNIIKANDQL
KKLLCLDQPHLEGKRINEILANPSIASNRPVYLQNKELHLKVKPSRNIRHVMVDKIPIYK
DNHWIGSMIMLKEIEQVRQFVNRLSGNQAKITFDDIIGKHPYFLQKLNEAKLAAATDSNV
LIMGESGTGKEMLAQAIHNASKRRNKPFIAINCGGIPRDLLGSELFGYVEGAFTGAKKGG
SAGKFELADGGTLFLDEIGEMSLEMQVLLLRVIQEKEVMRIGGHKVIPVDVRIIAATNKN
LREEVQKGSFREDLFFRLHVMPITLPPLRERKEDIPLLVHHFISKLCQKLNKPFPEIRPD
FFQALMQYDWPGNIRELQNILERTLNQHTNSILTANDLPEEMFQMFPSLKKKEVPVHRDD
IKKQSIIQALRLCNGNISKAAKHLGISRSTFYRQMRKFNIAY
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
gtgaatagccggcgggaggatgtcaaagaaatgtggaagcgctttatttttggcgatgag
ctggatgaaaagctttccccgattgtcaaagactcatggattcgctctaaaaaatggaag
gtagatcctttccggccgtatggttgtataaaaacaatagacatggcgcaataccaatac
ttgattgatttatcaataccgttaatggaagggctttattccatcgtaaagggatcggga
tttttagtcattctttgcaatgaaaaagggcagttactaaaatcactcggcgatcccgaa
acactggagatggcagcgcaaatcggctttgtcgagggagccgattggagtgaacaaacg
atggggaccaatgcgattggcacgtccattgtgatcgatcagcctgtacaaatatttgcg
gaagaacattattcgcaaatatgccaatcatggacttgttccgcggccccgattcacgat
tccaatggcagcatcatcggggtgttaaatgtatccggaccatatgaaaaagtgcatcct
cacacgctggggatggtggtttccgcggtcaaagctattgagtatcaattgaaattaaat
gagaatgtggaaaaaaatatgatgatgcaaaggtttctggaagcgacaaccaataatatg
aaagaaggcatcctcattattgacacagaagggaacattataaaggcgaacgatcagctg
aagaaactgctttgccttgatcagccgcatctcgaaggaaaaagaatcaacgaaattttg
gccaatccatcgattgcttccaatcggcctgtctacctgcaaaacaaggaactccattta
aaagtgaaaccatcaagaaacatccgtcatgttatggttgataaaattcccatctataaa
gacaaccattggatcggttcgatgattatgctgaaagaaattgaacaagtgcgccaattt
gtcaaccggctatccggaaaccaggcaaaaataacatttgatgacattatcggaaaacat
ccttattttctgcaaaaactgaatgaagcaaaactcgcggcagcgaccgactccaacgtt
ttgatcatgggagaaagcggaacgggaaaagaaatgctcgcgcaagccattcataatgca
agcaagcgaagaaacaagccgtttattgccatcaattgcggcggaatccctcgcgatctt
ctcggcagcgagctgtttggctatgtggaaggcgcctttactggagcgaaaaaaggcgga
agtgcgggaaaatttgagcttgctgatggcggcactctctttttggatgaaattggcgaa
atgtctttagaaatgcaggtcctgcttttgcgtgtcattcaggaaaaagaagtgatgcgg
attggcggccataaagtgataccggtggatgtccgcattattgcggcgacgaataaaaac
ctccgcgaagaagtgcaaaaaggaagtttcagggaagatctgttctttcgccttcatgtg
atgccgatcaccttgcctcctttgcgggaaagaaaagaagatataccgcttcttgtccat
cattttatcagcaagctttgccaaaaattaaataagccgtttccggaaatccggccagac
tttttccaagcactcatgcagtacgactggccggggaatatccgggaattgcaaaacata
ttagaaagaacgttaaaccaacatacgaactcgattttaaccgcaaacgatttgccggaa
gaaatgtttcaaatgtttccaagtttgaagaagaaagaagtgccggtgcatagagacgat
attaaaaaacagtccatcattcaggcattacgtttatgcaacgggaatatttcgaaagcg
gctaagcatttagggatttccagaagcactttttatcggcaaatgcgaaaatttaacatc
gcttattag
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