KEGG   Geobacillus sp. Y4.1MC1: GY4MC1_2560
Entry
GY4MC1_2560       CDS       T01348                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
gmc  Geobacillus sp. Y4.1MC1
Pathway
gmc02024  Quorum sensing
gmc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gmc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GY4MC1_2560
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GY4MC1_2560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmc03019]
    GY4MC1_2560
   03036 Chromosome and associated proteins [BR:gmc03036]
    GY4MC1_2560
Messenger RNA biogenesis [BR:gmc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     GY4MC1_2560
Chromosome and associated proteins [BR:gmc03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    GY4MC1_2560
SSDB
Motif
Pfam: Hfq LSM Hfq_1 DUF5608
Other DBs
NCBI-ProteinID: ADP75259
UniProt: A0A7U3YGB6
LinkDB
Position
complement(2544746..2544970)
AA seq 74 aa
MKNSINIQDQFLNQLRKDGTQVTVFLLNGFQLRGYIKGFDNFTVLLEVQGKQQLIYKHAI
STFAPEKNVQFETE
NT seq 225 nt   +upstreamnt  +downstreamnt
atgaaaaattcgattaacattcaagaccaatttttaaatcaattgcgaaaagatggaact
caagtcactgtgtttttattgaatggttttcagctccgcggttatatcaaaggatttgac
aacttcactgttttgctggaagttcaaggaaaacaacagctcatttataagcacgcgatt
tcgacgttcgcgccggaaaaaaatgttcaatttgaaacagagtaa

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