Geobacillus sp. Y4.1MC1: GY4MC1_2560
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Entry
GY4MC1_2560 CDS
T01348
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
gmc
Geobacillus sp. Y4.1MC1
Pathway
gmc02024
Quorum sensing
gmc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GY4MC1_2560
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GY4MC1_2560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmc03019
]
GY4MC1_2560
03036 Chromosome and associated proteins [BR:
gmc03036
]
GY4MC1_2560
Messenger RNA biogenesis [BR:
gmc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GY4MC1_2560
Chromosome and associated proteins [BR:
gmc03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
GY4MC1_2560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
DUF5608
Motif
Other DBs
NCBI-ProteinID:
ADP75259
UniProt:
A0A7U3YGB6
LinkDB
All DBs
Position
complement(2544746..2544970)
Genome browser
AA seq
74 aa
AA seq
DB search
MKNSINIQDQFLNQLRKDGTQVTVFLLNGFQLRGYIKGFDNFTVLLEVQGKQQLIYKHAI
STFAPEKNVQFETE
NT seq
225 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattcgattaacattcaagaccaatttttaaatcaattgcgaaaagatggaact
caagtcactgtgtttttattgaatggttttcagctccgcggttatatcaaaggatttgac
aacttcactgttttgctggaagttcaaggaaaacaacagctcatttataagcacgcgatt
tcgacgttcgcgccggaaaaaaatgttcaatttgaaacagagtaa
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