Geobacillus sp. Y4.1MC1: GY4MC1_2604
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Entry
GY4MC1_2604 CDS
T01348
Name
(GenBank) metal dependent phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
gmc
Geobacillus sp. Y4.1MC1
Pathway
gmc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GY4MC1_2604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmc03019
]
GY4MC1_2604
Messenger RNA biogenesis [BR:
gmc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GY4MC1_2604
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
EAD2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ADP75300
UniProt:
A0A7U3YGE3
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All DBs
Position
complement(2594626..2596191)
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AA seq
521 aa
AA seq
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MGSVIISALLVLLALVVGAVVGFFVRKSIAEAKIGGAQAAANQIIEEAKREADALKKETL
LEAKDEIHKLRTEVEREIRDRRSELQKQENRLLQKEENLDRKDEALNKREALLEKKEEAL
NKRQQHIEQMESKVEELVQQEQMELERISGLSREEARQIVLERVEKELSHEIAVMVKEAE
TRAKEEADKKAKAILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETL
TGIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKARREVDEHI
REVGEQTTFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSVEVAFLAGLMAAELGEDEM
LARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSVIAVL
VAAADALSAARPGARSETLENYIRRLEKLEEIAESYEGVEKSYAIQAGREVRIMVKPDAI
DDLEAHRLARDIRKRIEEELDYPGHIKITVIRETRAVEYAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgggttctgtcatcatctccgctttgcttgtcttgcttgccttagttgtcggtgccgtt
gttggcttttttgttcggaaatccattgcggaagcgaaaattggcggcgcacaagcagca
gcaaatcaaattattgaagaagcaaaacgcgaagctgatgcgctcaaaaaggaaacgctt
cttgaagcaaaggatgaaattcataaacttcgcacagaagtagaacgcgaaattcgcgat
cgaagaagcgaattgcaaaaacaagaaaatcgtttgttgcaaaaagaagaaaatctggac
cggaaggatgaagcgctgaacaaacgcgaggcgcttttagaaaagaaagaagaagcacta
aataaaagacaacaacatattgaacaaatggaaagcaaagtggaagaactcgttcaacaa
gaacaaatggagctggaacgaatttccggattatcgcgcgaagaagcgcggcaaattgtt
ttggaacgtgtggaaaaagagctgtctcatgaaattgcggtaatggtgaaagaagcggaa
acgcgcgcaaaagaagaagcggataaaaaggccaaagccattttatcgctggcgattcag
cgctgtgcagctgatcatgttgccgaaacgacagtatctgtcgttaatttgccaaacgat
gaaatgaaaggacggatcattggccgtgaaggccggaatattcgtacgctggaaacgctc
accggcatcgatttgattattgatgatacgccggaagcggttattttatcgggatttgac
ccaatccgtagagagacggcgagaatcgccttggacaaactggttcaagatgggcgcatt
catccggcgagaattgaggaaatggtggaaaaagcaagacgggaagtggatgagcatatt
cgtgaagtcggcgaacagacaacgttcgaagttggtgttcacggattgcacccggatttg
atcaaaattttgggacggcttaaattccggacaagctacgggcaaaatgtgttgaaacat
tcggtggaagtggcgtttttagctggtttgatggcggcggaacttggagaagacgaaatg
ctggcaagacgcgctggtctccttcatgatattggcaaagcgattgaccatgaagtggaa
gggagccatgtggaaatcggggtggaattagcgacaaaatataaagaacacccagttgtg
attaacagcattgcttcccatcacggagatacggagccgacttccgtcattgcggtgctt
gtcgcggcggcagatgccctttcggcggcaagaccgggagcgcgtagtgaaacgctggaa
aactatattcgccgtcttgaaaaattggaagaaatcgctgaatcgtacgaaggtgtggaa
aaatcatatgcgatccaagcgggacgggaagtgcgcattatggtgaaaccagatgcgatc
gatgatttagaagcccatcgattggcgcgggacatccgcaaacggatcgaggaagagctt
gattatccagggcatatcaaaattaccgttattcgtgaaacgagagcggttgaatacgca
aaataa
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