Geobacillus sp. Y4.1MC1: GY4MC1_2641
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Entry
GY4MC1_2641 CDS
T01348
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gmc
Geobacillus sp. Y4.1MC1
Brite
KEGG Orthology (KO) [BR:
gmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gmc03016
]
GY4MC1_2641
Enzymes [BR:
gmc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GY4MC1_2641
Transfer RNA biogenesis [BR:
gmc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GY4MC1_2641
Prokaryotic type
GY4MC1_2641
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ADP75337
UniProt:
A0A7U3YGH6
LinkDB
All DBs
Position
complement(2636264..2637172)
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AA seq
302 aa
AA seq
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MDGVLLLHKPPGMTSHDCVARIRRMLRTKKVGHTGTLDPNVSGVLPICIGKATRIAEFLT
GSTKTYEGEVTLGIATTTEDSDGEIVAKQKVDRIIHRSDIEEVFRQLTGEIAQTPPMYSA
VKVNGKKLYEYARAGVEVERPTRIVTIHELTLLEERDTFSGDTVSFRFRVVCSKGTYVRT
LAVMIGERLGYPAHMSDLVRTASGPFSLQDCVTFEQLERYIENGQVQSVLLPIEKALFHL
PKYEINDKVAEKVKNGAILPLPAFLQSLQGPVLMMTKQSEALALYIKHPAKPHLMKPLKV
FR
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggacggagtattgttattgcacaaaccgccgggaatgacatcgcacgattgtgttgcg
cgcattcgccgcatgttgcggaccaaaaaagtaggccatacagggacgcttgacccaaac
gtatcaggagttttgccaatttgtattggaaaggcgacgcgcatcgccgaatttttaaca
ggatcgacgaaaacatacgaaggtgaagtgacattagggatcgcgacaacaacagaagac
agcgatggcgaaatcgtcgcaaagcaaaaagtggaccgcatcattcatcgcagtgacatc
gaagaagtgttccggcagctgacgggggaaattgcgcaaacgccgccaatgtactccgcg
gtaaaagtgaacggaaaaaagctgtatgaatatgcgcgcgcgggcgttgaagtcgagcgg
ccgactcgcattgtcacgatccatgaactaacattgctggaggaacgagacacgttttct
ggtgacaccgtttcatttcgctttcgtgtcgtttgcagcaaaggcacctacgttcgcacg
ttagcggtaatgatcggcgaacgccttggctatccggcgcatatgtctgaccttgttcgc
acggcatccggtcccttttctttgcaagattgtgtcacatttgagcaattggaacgttac
atcgagaacgggcaagtacaatccgttttgcttccgatcgaaaaagcgctttttcatttg
ccgaaatatgaaataaatgataaagtagcggagaaagtaaaaaacggagcgatattgccg
cttcccgcgtttttgcaatcattgcaaggtccggtattaatgatgaccaaacaaagcgag
gcgctcgctctttatataaagcatcctgctaaacctcacttgatgaagccgctgaaagta
ttccgataa
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