Geobacillus sp. Y4.1MC1: GY4MC1_2738
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Entry
GY4MC1_2738 CDS
T01348
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
gmc
Geobacillus sp. Y4.1MC1
Pathway
gmc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GY4MC1_2738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmc03400
]
GY4MC1_2738
Enzymes [BR:
gmc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GY4MC1_2738
DNA repair and recombination proteins [BR:
gmc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GY4MC1_2738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PIF1
ATPase_2
AAA_30
AAA_19
AAA_16
nSTAND_NTPase5
Zn_ribbon_6
ADDB_N
Zot
TrwB_AAD_bind
SWI2_SNF2
Dynactin_p62
RecA_N
T2SSE
nSTAND6
SLFN-g3_helicase
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
ADP75434
UniProt:
A0A7U3YGP0
LinkDB
All DBs
Position
complement(2725772..2728186)
Genome browser
AA seq
804 aa
AA seq
DB search
MKVAEVIVDVPARQTDRPFDYAIPEKWEDILQPGMRVTVPFGTRRLQGFVIHIKSHSDVK
TLKPIEAVLDVTPVLNEELLELGKYLTETTLCFAISAYQAMLPAALKAKYEKEIRLVREE
NRALLPETIQPLFQDRSTVDWKEVEHSDWLRPLQKAIQQGYLEVVYHVKEKAAAKTVKYV
ELAQSHEEVGRAIDALPANAAKQRQLLTALLSANEAVPLRSLLEQTGATYASLKSLVAKG
LVAEKEVEVYRDPYEDRSFPTTAPLSLTAEQEKALSSVIESVRTNKHEVFLLYGVTGSGK
TEVYMQAIEEVLRQGKEAIVLVPEISLTPQMVKRFKGRFGSQVAVLHSGLSIGEKYDEWR
KIHRKEVQLVVGARSAIFAPFENLGMIIIDEEHETSYKQEENPRYHARDVAIYRARVHGC
PVVLGSATPSLESFARAKKGVYQLLTLQKRVSDNGMPDVHIVDMREELRSGNRSMFSRAL
FEKLKDRLHKGEQSVLFLNRRGYSTFVMCRGCGYVIRCPHCDISLTYHRAGQRLKCHYCG
YEEPITYHCPSCGNEHIRFFGTGTQKVEEELTKLLPEARVIRMDVDTTSRKGAHERLLAE
FGEGKADILLGTQMIAKGLDFPKVTLVGVLAADTTLHLPDFRASEKTFQLLTQVSGRAGR
HALPGEVVIQTYTPEHYSIALAAKHDYDAFYQREMVLRKMHGYPPFYYLTLITVSHPEIT
KAVAVTDKIAAYLRAQLSNEAIILGPVASPIARLHDRYRYQCMIKYKREPNMTRALKAVI
DRYQHDVSQGDLSITIDTNPYTMM
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtagcagaggtaattgtcgatgtgcctgcgcgccagacggaccgtccttttgat
tatgcaattccggaaaaatgggaagacatactgcagcctggcatgcgcgtcactgttccg
ttcggcacgcggcgattgcaaggatttgttattcatattaaatcacattcagatgtgaaa
acattgaaaccgatcgaagcggttttggacgtcactcccgtattaaacgaagaactgctt
gaactcgggaaatatttaacggaaacgacgctttgttttgcgatttccgcttaccaggcg
atgcttccggcggcgctgaaagcaaaatacgaaaaggaaatccggctcgtccgcgaagag
aaccgcgctttgctgccagaaacgattcaaccgctttttcaagaccgttcaacggttgat
tggaaggaagtagagcatagcgattggctacgacctttgcaaaaagcgattcagcaaggc
tatttagaagtcgtgtaccatgtgaaagaaaaagcggcggcgaaaacggtgaaatatgtg
gaattggcgcaatcgcacgaagaagttggacgtgcgatcgatgcgttgccggcgaatgcc
gccaagcaaagacaattgttgacggctcttctgtcggcaaacgaagcggtgccattgagg
agcctgttggagcagacgggcgctacctatgcttcgctcaaatcgttagttgccaaagga
cttgttgccgaaaaggaggtcgaagtatatcgcgacccgtacgaggaccgctcatttcca
acaacagcgccgctttcgctaaccgctgagcaagaaaaagcactttcttccgtcatcgag
tccgtgcgcacgaataaacatgaggtgtttttgctatacggcgtgacaggcagcggaaaa
acagaagtgtatatgcaagcgatcgaagaagtattgcggcaaggcaaagaagcgattgtc
ctcgttccggaaatttcgctgacgccgcagatggtcaagcggtttaaagggcgcttcggt
tcgcaagtggccgtgcttcatagcggtttatctatcggagaaaaatacgatgaatggcga
aaaatccatcgaaaagaagtgcagcttgtcgtcggcgcccgttcagcgattttcgctcca
tttgaaaatctcggcatgattatcattgacgaagaacatgagacaagctacaagcaagag
gaaaatccgcgctatcacgcccgcgatgtggcgatttaccgcgcccgcgtccacggctgc
cctgtcgtgctcggcagcgccactccttcgcttgaatcgtttgcaagggcgaaaaaaggg
gtatatcagttactgacattacaaaaacgggtaagcgacaacgggatgccggacgttcat
attgtcgatatgcgggaagaactgcggagcggaaaccgttccatgttttcgcgcgcgtta
ttcgagaaattgaaagaccgcctccataaaggggagcagtctgtattgtttttaaatcgg
cgcggctattcgacatttgtcatgtgccgcggctgcggctatgtgattcgctgcccgcat
tgcgacatttcattaacataccaccgcgctgggcagcggttaaaatgccattattgcgga
tacgaagaaccgattacgtaccattgtccatcatgtggaaacgagcatattcgctttttt
ggaacagggacacaaaaagtggaagaagaactgacgaaactgcttcctgaagcgcgcgtg
atccgcatggatgtcgacacgacgagccgcaaaggcgcccacgaacgcctgcttgccgag
tttggcgaaggaaaagctgatattttgcttggcacgcaaatgattgcgaaagggcttgat
tttccaaaagtaacgcttgtcggcgtgcttgctgccgatacgacgctccatcttcctgat
ttccgcgcttctgaaaaaacgtttcagctgctgacgcaagtaagcgggcgcgccgggcgc
catgcgcttcccggcgaagtcgtcatccaaacgtacacgccggagcattacagcatcgcc
cttgctgcgaagcacgattatgatgcattttatcaaagagaaatggtgcttcgcaaaatg
catggctatccgccattttactatttgacattaatcaccgtgtcccatccggaaataacg
aaagcggtggctgtaacggataaaattgcggcatatttgcgggcgcagctgtcaaatgaa
gcgatcattctcggccctgtcgcttcgccgattgcccgccttcatgatagatatcgctac
caatgcatgataaaatacaaacgggagccgaacatgacgcgtgcattaaaagcggttatc
gatcgctatcagcacgacgtttcccaaggggatttgtcgattacgatcgatacgaatcca
tatacgatgatgtaa
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