Geobacillus sp. Y4.1MC1: GY4MC1_3128
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Entry
GY4MC1_3128 CDS
T01348
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
gmc
Geobacillus sp. Y4.1MC1
Brite
KEGG Orthology (KO) [BR:
gmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmc03400
]
GY4MC1_3128
Enzymes [BR:
gmc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GY4MC1_3128
DNA repair and recombination proteins [BR:
gmc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GY4MC1_3128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADP75805
UniProt:
A0A7U4DLZ0
LinkDB
All DBs
Position
complement(3116731..3120249)
Genome browser
AA seq
1172 aa
AA seq
DB search
MMPMSLRFLLGRSGSGKTTTCLNEIRDKLKEDPKGNPIVYLVPEQMTFQSEYALIHTPGL
AGMMRAQVFSFTRLAWRVLQETGGMSRYHINEIGMQMMIRKIVEHRKQQLKLFGRAVDKA
GFIQQLHDMITECKRYCVAPQHLREHVKFLEEQGKRPAEKVLADKLNDISIVYEELERSL
LNHYIHSEDYLRLLAEKIPHSRYLRNAEIYIDGFHQFTPQEYMVLEQLLIHCKRVTVSLT
VDAPYDDWLPNELHLFYLTAKTYHDIRQMALANGIALEDAIILEKNMRHQEGALAHLEAH
YHARPAVAFPEKTDSIIVYEAANRRAEVEAIAREIVRLVRDEGYRYRDIALIVRNTEDYR
DLVKTIFSDFHIPYFMDEKESMHHHPLIELLRASMEIITSRWRYESVFRAIKTDLLFPVE
EDTAALREAMDRLENYVLAYGIKGEKWTNGERWTYRRYQALEGLSVPQTDEEKQYEEKLN
QWRDMIAAPLSKLERRMRRAKDGRSLCEAIYLFLEELQIPRKLEKMSKEAEEQGRLMEAR
QHEQVWNAVIDLFNQYVDMLGSEPIPLAEFAKIIETGLDRLEFSLVPPAIDQVIIAQLDR
SRLIDVKCAFIVGVNEGVIPAKAKEDGLLAETEREILQQFGTRVAPGGREQLFYEPFFIY
LALTCPSERLYVTYPLANEEGKALSPSLIIKQLADLFPNLQKHVCGNDPLDAEHAEQQAF
ITVPRATLTYLVAQLQAWKRHYSIAPLWWDVYNFYASDPQWRKQARKAIAGLFYTNAATP
LKKEISKRLYGKKIQASVSRMEQFQKCPFSHFVSHGLRLKERDVFRLDAPDIGQLFHYAL
KIISDRLREAKIDWRYLSKQQCEQLSAEAVEQIAPLIQQQVLLSSNRYHYMKRKLQNVVA
RTTNVLSEHAKASGFVPIGLELEFGPNGALPPLTFRLPDGTVMELVGRIDRVDKAESSRG
VLLRVIDYKSSAKTLNLAEVYYGLALQILTYLDIVLTYAEQLVGKEAFPAGILYFHVHNP
IIKSDQLLHDEKEAERKLLEQFKMRGLLLGDVEAIRLMDTQMEEGKWSLIVPAQITKKGA
IHAKSSVVSEENFWHLRRHIRHLFQMIGMQIIDGIVDVAPYKLKEQTPCEFCAFKPVCQF
DESFPNNRYRLLVPQENHEIVQKLSEGKDFDE
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
gtgatgccgatgtcgctccgatttctcttaggaagatccggaagcggaaaaacaacgaca
tgtcttaacgaaattcgcgataaactgaaagaagatccgaaagggaacccgattgtttat
ctcgttccggaacaaatgacgtttcaatcggaatatgcattaatacatacaccaggattg
gccggaatgatgcgggcgcaggtgtttagctttacgcggttggcgtggcgcgttttgcaa
gaaacgggcggaatgagccgataccatattaatgagattggcatgcagatgatgattcgg
aaaattgtcgaacatcggaagcaacaattgaaattatttggccgtgctgtcgataaagcg
ggctttattcaacagcttcacgatatgattacagaatgcaagcgctactgtgttgctcca
cagcatcttcgcgaacatgtcaaattcttggaagaacaaggaaaaagaccggccgaaaag
gtgttagcggataagttaaacgatatatctatcgtttatgaggagcttgagagaagctta
ttgaatcattacatacattctgaagactatttgcgattgcttgctgaaaaaatcccgcat
tcccgctatttgcggaatgcggaaatttatattgacgggtttcaccaatttacgccgcag
gagtatatggtgcttgaacagctgcttattcattgcaagcgcgtcactgtttcattaacg
gtggatgccccgtacgacgattggctgccaaatgagctacatttattttatttaaccgcg
aaaacgtatcatgatattcgccaaatggcgttggcaaacggaatcgcattggaagatgcc
atcattctcgaaaaaaatatgcgccatcaagaaggggcgcttgcccatctggaagcgcat
tatcatgcccgtcccgccgtcgctttcccggaaaaaacggattccatcatcgtatatgaa
gcggcaaaccgccgcgcggaagtcgaagcgattgcccgcgaaatcgtccgccttgttcgt
gacgaaggatatcgttaccgcgatatcgctttgattgtccgcaatacggaagattatcgt
gatttagtgaaaaccattttttctgattttcatattccttattttatggatgaaaaagag
tcgatgcaccaccatccgcttattgagttgctgcgggccagcatggaaattataacatcg
cgctggcgctacgaatcggtgtttcgcgccattaagaccgatttactatttccagtggaa
gaagataccgccgcgctgcgcgaagcgatggaccggctggaaaactatgttcttgcatac
gggattaaaggggaaaagtggacgaatggcgaacggtggacatatcgccgctaccaagcg
ttggaagggctatccgtcccgcaaacagatgaggaaaagcaatatgaagaaaaattgaat
caatggcgtgatatgattgcagcaccgctttcaaagctagaacgccgcatgcgcagagcg
aaagacggcaggagcctttgcgaagcgatttatttgtttttagaagaattgcaaattcct
agaaagctagagaaaatgagcaaggaagcggaagaacaaggaaggctgatggaagcgcgg
cagcatgagcaagtatggaatgcggtgattgatttattcaatcaatatgtcgatatgtta
ggaagcgagccgatcccgctggcggagtttgcgaaaattatcgaaacggggcttgaccgc
cttgagttttcgctcgttccgcctgcgatcgaccaagtgattatcgcccaattagaccgc
tcgcggcttattgatgtcaaatgcgcgtttattgttggcgtaaatgaaggggtcatcccg
gcgaaagcgaaagaagacggattgctcgccgaaacggaacgagagattttgcagcagttt
ggaacgagagtcgcgccggggggaagagaacagctgttttatgaaccgtttttcatttat
ttagcattaacgtgcccaagcgaacgcctgtatgtgacatatccgctggcaaacgaagaa
ggaaaggcgctctcgccttcgctcattattaagcagcttgccgatttattcccgaatttg
caaaagcatgtttgcggtaacgatccgcttgatgcggagcatgcggaacaacaagcattt
atcaccgttccgcgggcgacgctgacatatcttgtggcgcagctgcaagcatggaagcgg
cattattcgattgcgccgctttggtgggatgtatataacttttacgcaagcgatccgcaa
tggagaaagcaggcgcgcaaagcgattgccgggctgttttatacgaatgcggcaacgccg
ctgaaaaaagaaataagcaagcggctgtacggaaaaaaaattcaggcgagcgtatcgcgc
atggagcagtttcaaaaatgcccgttttcccactttgtttctcatggattgcggctgaag
gagcgggatgtttttcggcttgatgctcctgatatcgggcagctgtttcactacgctctg
aaaatcatttccgaccgcctccgtgaagcaaaaatagattggcgctatttgtccaaacaa
caatgtgaacagttgtcagccgaagcagtagaacaaattgcgccgctcattcagcagcaa
gtgctgctcagctccaatcgttaccattatatgaagcggaagttgcagaacgttgttgcg
cggacgacaaacgtattaagtgagcacgccaaggcaagcggctttgtgccgataggcctc
gagctggaatttgggccaaacggcgcacttccgccgcttacgttccgccttccggacgga
acggtaatggagcttgtcggacgcatcgatcgcgttgataaagcggaaagttcgagagga
gtgctgctgcgtgtcattgactataaatcaagcgccaaaacgctcaatttagcagaagtg
tactatggtctggcgctgcaaattctcacttacttggacattgtgctcacatatgcggaa
cagctggtcggcaaagaagcttttccggccggaattctttatttccatgtgcacaatccg
attattaaaagcgaccagctccttcatgatgaaaaagaagcggaacggaagctgctggaa
caatttaaaatgcgcggtcttttgcttggggatgtggaagcaatccgcttgatggacacg
caaatggaggaaggaaaatggtcgttgatcgttccggcgcaaattacgaaaaaaggggcg
attcacgccaaatcttctgtcgtcagcgaggagaatttttggcatctccgccggcacatc
cggcatctgtttcaaatgatcggcatgcaaattatcgatggaatcgttgatgttgcacca
tacaagctgaaagagcagacgccttgcgagttttgtgcgtttaagccagtttgccagttt
gacgaatcgtttccaaacaatcgctatcgcctgttagttccgcaagaaaatcatgaaatt
gtgcaaaaattatcggaagggaaggacttcgatgagtaa
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