Geobacillus sp. Y4.1MC1: GY4MC1_3161
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Entry
GY4MC1_3161 CDS
T01348
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
gmc
Geobacillus sp. Y4.1MC1
Brite
KEGG Orthology (KO) [BR:
gmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmc03019
]
GY4MC1_3161
Messenger RNA biogenesis [BR:
gmc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GY4MC1_3161
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ADP75838
UniProt:
A0A7U4DMB1
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Position
complement(3150252..3151235)
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AA seq
327 aa
AA seq
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MAKGIIHYDVGEQVDVYLLIKSVTKGIASNGKPFLTLILQDKTGDIEAKLWDVSPEDESV
YVPESIVKVFGDIHNYRGKTQLKIRSIRPARAGDDVRVSDFLETAPMKREEMMEKITQYI
LDMENPNIQRITRYLLKKYEQKFFDYPAATKNHHEFISGLAYHVVSMLELAKALVNLYPS
LNKDLLYAGVILHDLGKVIELSGPVSASYTLEGNLLGHISIMVSEISKAAEHLGISGEEV
VVLQHMVLSHHGKTEWGSPKPPMVKEAEILHYIDNLDAKLNMIDRALEKVKPGEFTERIF
ALENRSFYKPMFLSAPAVSKQEKRGIS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
ttggcgaaaggaatcattcattatgatgttggggaacaggtagatgtctacttgctcatt
aagtcagtgacaaaagggatcgccagtaacgggaaaccgtttttaacgttaattttgcaa
gacaaaacaggggacattgaagcaaaattatgggacgtgtcgccggaagatgagagcgtc
tatgtgccggaaagcattgtcaaagtgtttggcgatattcacaattaccgtggcaaaacg
cagctgaagattcgttcgattcgccccgctcgcgccggggacgatgttcgggtatccgac
tttctcgaaactgccccgatgaaacgcgaagagatgatggagaaaattacgcaatacata
ttggatatggaaaatccaaacatccaacggattacccgctatttgttaaaaaagtacgaa
caaaaattttttgattatccggcggcaacgaaaaatcaccatgaatttatttccggattg
gcgtaccatgtcgtgtcgatgctggaattggcaaaagcacttgtgaatttatatccatcg
ttgaataaagacttattgtacgctggcgtgattttgcacgacctcggcaaagtgatcgag
ctatccggcccggtgtcggcatcatatacgctggaaggcaatttgcttggccatatttcg
attatggtgagcgaaatcagcaaagcggccgaacatctcggcattagcggggaagaagtg
gtcgtgctgcagcacatggtcctttcccatcatggaaaaacggaatggggcagcccgaag
ccgccgatggtgaaagaagcagaaattctgcattacattgataaccttgacgccaaattg
aacatgatcgaccgggcgcttgaaaaagtaaagccgggagaatttacagaacggattttc
gcgctggaaaatcgttcgttttataaaccgatgtttttatctgccccggccgtttccaaa
caagaaaaaagagggatatcataa
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