Geobacillus sp. Y4.1MC1: GY4MC1_3525
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Entry
GY4MC1_3525 CDS
T01348
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gmc
Geobacillus sp. Y4.1MC1
Pathway
gmc03420
Nucleotide excision repair
gmc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GY4MC1_3525
03430 Mismatch repair
GY4MC1_3525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmc03400
]
GY4MC1_3525
Enzymes [BR:
gmc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GY4MC1_3525
DNA repair and recombination proteins [BR:
gmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GY4MC1_3525
MMR (mismatch excision repair)
Other MMR factors
GY4MC1_3525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_30
ResIII
Terminase_6N
DEAD
DUF3226
Motif
Other DBs
NCBI-ProteinID:
ADP76169
UniProt:
A0A7U3YI22
LinkDB
All DBs
Position
complement(3512649..3514841)
Genome browser
AA seq
730 aa
AA seq
DB search
MNFLSEKLLANLNEQQQAAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLLAEKQVAPWNIL
AITFTNKAAREMKERVQALLGGAAEEIWISTFHSMCVRILRRDIDRIGIDRNFSILDTTD
QLSVLKNILKEKNIDPKKFDPRSILGTISSAKNELLSPEKFAKKAGNYYEKIVSDVYEEY
QKRLLRNHALDFDDLIMTTIQLFERVPEVLEHYQYKFQYIHIDEYQDTNRAQYMLVKMLA
SRFQNICVVGDADQSIYRWRGADIQNILSFEKDYPNAKVILLEQNYRSTKRILQAANEVI
ENNVNRKPKKLWTENPEGQKIVYYEAMNEADEAQFVAGKIKEYVESGKRRYSDFAVLYRT
NAQSRVMEEVLLKSNIPYQIVGGLKFYDRKEIKDILAYLRVIANPNDDISLLRIINVPKR
GIGASTLDKIVNYASENELSVFEALGELEHIGLSARIAASLLEFRRMLEQWGQLQEYVSV
TELVEEVLDKSGYREMLKAENTLEAQSRLENIDEFLSVTKHFENVSEDKSLIAFLTDLAL
ISDIDQLNDADGEDGDAVVLMTLHSAKGLEFPVVFLIGMEEGIFPHSRSLEDEDEMEEER
RLAYVGITRAEEELFLTSAQMRTLFGYTNMNAVSRFIHEIPEELVERVNKRTAWAPAGKQ
TAFRKMAVASSTDGETVPWKVGDKVEHKKWGIGTVVSVRGEGEDKELDIAFPSPVGIKRL
LAKFAPITKV
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
gtgaattttttgtcggaaaaactactcgctaacttaaatgaacaacagcaagcagcggtt
aaaacgacggaaggaccgcttctcatcatggcgggggcgggaagcggaaaaacgcgcgtg
ttaacgcaccggatcgcctatttgctggcggaaaagcaggtcgcgccgtggaacatttta
gcgataacgtttaccaataaagcggcgcgcgaaatgaaggaacgcgtgcaggcgctgctt
ggcggggcggctgaggaaatttggatttccacgtttcactccatgtgtgtccgcattttg
cgccgcgatattgatcgcatcggcattgaccgcaatttttccattttagacacgaccgac
caactttcggtgttaaaaaacattttaaaagaaaaaaatatcgacccgaaaaaatttgac
ccccgctcgatactcggaacgatcagcagcgcgaaaaacgaattgctctcccctgaaaag
tttgcgaaaaaagccggaaactactatgaaaaaatcgtcagcgacgtatatgaggaatat
caaaagcggcttttgcgcaaccatgcgctcgattttgatgacttaattatgacgacgatt
cagttgtttgagcgtgtgccggaagtgctcgagcattatcaatataaatttcaatacatt
catattgacgagtatcaagacaccaaccgggcgcaatatatgcttgtaaaaatgctggcg
tcgcgttttcaaaacatatgcgttgtcggcgatgccgatcagtcgatttatcgctggcgc
ggcgcagacatccaaaacattttatcgtttgaaaaagattatccgaacgcgaaagtcatc
ttgcttgagcaaaattatcgttcaacgaagcggattttgcaggcggcaaacgaagtcatt
gaaaacaacgtcaaccgcaagccgaaaaagctatggacggaaaacccggaaggacaaaaa
atcgtatattatgaagcgatgaatgaagcggatgaagcgcaatttgttgccggcaaaatt
aaagaatatgtggaaagcggaaaacgccggtattctgattttgcggttttataccgcacg
aacgcccaatcgcgggtgatggaagaagtgttgctcaagtcgaacattccttaccaaatt
gtcggcggcctgaagttctatgaccgcaaagaaattaaagatattttggcatatttgcgg
gtgattgcaaacccgaatgatgatattagtttgctgcgcatcattaatgtgccgaaacgg
ggcatcggtgcttccacgctcgataaaatcgtaaactatgcttctgaaaacgaattatcg
gtattcgaagcgctcggcgaacttgagcatattgggctctctgcgcgcatcgccgcttct
ttgctggaatttcgccgcatgcttgaacaatgggggcagctgcaagaatacgtttctgta
acggaattagtggaagaagtgttggacaagtctggttaccgcgagatgctgaaagcggaa
aacacgctggaggcgcaaagccgtttggaaaacatcgatgagtttttgtcggtgacgaag
cattttgaaaacgtaagcgaagataagtcgttaattgcgtttttaaccgacttggcatta
atttctgatattgaccagcttaatgacgcggacggcgaagacggggacgcagtcgtgctt
atgacgctccattccgcaaaagggttggaatttccggttgtctttttaatcgggatggaa
gaaggaatttttccacatagccgctcactggaagacgaagatgagatggaagaagagcgc
cgcctcgcttatgttgggattacccgcgcggaagaagaactgtttttaacaagcgcgcaa
atgcggacattgtttggatatacaaatatgaacgcggtatcccgcttcattcacgaaatt
ccagaagagctagtcgagcgggtgaacaaacgaacagcatgggcaccggccggaaaacaa
acggctttccggaaaatggcggttgcctcttctactgacggcgaaacggtcccttggaaa
gtcggagataaagtcgaacataaaaaatggggaatcggcaccgttgtcagcgttcgcgga
gaaggagaggataaagagcttgacatcgcgttcccaagcccggttggaattaaacggttg
cttgcgaaattcgctccgattacaaaggtgtaa
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