Geobacter metallireducens: Gmet_0029
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Entry
Gmet_0029 CDS
T00295
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gme
Geobacter metallireducens
Pathway
gme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Gmet_0029 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gme03019
]
Gmet_0029 (groEL)
03110 Chaperones and folding catalysts [BR:
gme03110
]
Gmet_0029 (groEL)
03029 Mitochondrial biogenesis [BR:
gme03029
]
Gmet_0029 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gme04147
]
Gmet_0029 (groEL)
Enzymes [BR:
gme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Gmet_0029 (groEL)
Messenger RNA biogenesis [BR:
gme03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Gmet_0029 (groEL)
Chaperones and folding catalysts [BR:
gme03110
]
Heat shock proteins
HSP60 / Chaperonin
Gmet_0029 (groEL)
Mitochondrial biogenesis [BR:
gme03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Gmet_0029 (groEL)
Exosome [BR:
gme04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Gmet_0029 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
Gmet_0029 (groEL)
Exosomal proteins of breast cancer cells
Gmet_0029 (groEL)
Exosomal proteins of colorectal cancer cells
Gmet_0029 (groEL)
Exosomal proteins of bladder cancer cells
Gmet_0029 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABB30279
UniProt:
Q39ZP5
LinkDB
All DBs
Position
34748..36388
Genome browser
AA seq
546 aa
AA seq
DB search
MAKIIKFDQEGRNAILKGVNTLADAVKVTLGPKGRNVIIEKSFGSPLITKDGVTVAKEIE
LEDKFENMGAQLVKEVASKTSDVAGDGTTTATVLAQAIYRQGSKLVAAGHNPMEIKRGID
SAVETIVAELQKISKPIKDHKEIAQVGTISANNDKTIGGIIAEAMEKVGKEGVITVEEAK
AMETSLETVEGMQFDRGYLSPYFVTDPERMEASLENANILIHDKKISNMKDLLPILEQTA
KSGRPLLIIAEDIEGEALATLVVNKLRGVLNICAVKAPGFGDRRKAMLEDIAVLTGGKVI
SEELGFKLENATFDMLGTAKRVTIDKDNTTIIDGDGSEADIQGRVKQIRAQIEETSSDYD
REKLQERLAKLVGGVAVIKVGAATETEMKEKKARVEDALHATRAAVDEGIVPGGGVAYIR
SLGALEGISLPAEQQFGVTLIKRALEEPIRQIAQNAGVDGSIVVDKVKNGKDAFGFNAAD
DEYVDMIAAGIIDPTKVSRSALQNAASVAGLMLTTEAMIADKPKEEAAMPAMPGGMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagattatcaagttcgatcaggaagggcgcaacgccatcctgaaaggtgtcaat
actcttgctgacgcggtcaaggtgaccctcggccccaagggacgcaacgtcatcatcgag
aagtcgttcggctccccgctcatcaccaaggacggcgtcaccgttgccaaggaaattgag
ctggaggacaagttcgagaacatgggcgcccagctggtgaaggaagtcgcctccaagacc
tccgacgttgccggcgacggcaccaccaccgccacggttctcgcccaggccatctaccgc
cagggctccaagctggtggccgccggccacaaccccatggagatcaagcgcggcatcgac
agcgccgttgagaccatcgtggccgagctccagaagatatccaagccgatcaaggaccac
aaggagatcgcccaggtcggcaccatctccgccaacaacgacaagaccatcggcggcatc
atcgccgaggccatggagaaggtcggcaaggaaggggtcatcaccgtcgaggaggccaag
gccatggaaaccagccttgagaccgtcgaggggatgcagttcgaccgcggctacctctcc
ccctacttcgtaaccgatccggagcgcatggaagcttccctcgagaacgccaacatcctg
atccacgacaagaagatctccaacatgaaggacctgctcccgatccttgagcagaccgcc
aagagcggccgtccgctgctgatcatcgccgaggacatcgagggcgaggctctggccacc
ctggttgtcaacaagctgcgcggcgtcctcaacatctgcgccgtgaaggctccgggcttc
ggcgaccgccgcaaggccatgctggaagacatcgccgttctcaccggcggcaaggtgatt
tccgaagagctcggcttcaagctcgagaacgccaccttcgacatgctcggcactgccaag
cgggtcaccatcgacaaggacaacaccaccattattgacggcgacggttctgaagccgat
atccagggccgcgtgaagcagattcgtgcccagatcgaagaaaccagcagcgactatgac
cgcgagaagctccaggagcgcctggccaagctcgtgggcggcgttgccgtcatcaaggtc
ggtgccgccaccgaaaccgagatgaaagagaagaaggcacgggtcgaggacgccctccac
gccacccgcgcagccgttgacgaagggatcgtccccggcggcggcgttgcctatatccgt
tccctcggcgcccttgaaggtatcagcctcccggcagagcagcagtttggcgttaccctc
atcaagcgcgcccttgaggagccgattcgccagatcgcccagaacgccggcgttgacggc
tccatcgtcgtcgataaggtgaagaacggcaaagacgcctttggcttcaacgctgccgat
gacgagtacgtggacatgatcgcggccggcatcatcgacccgaccaaggtttcccgttcg
gccctgcagaatgccgcttccgtggccggcctcatgctgaccaccgaggccatgattgcc
gacaagccgaaggaagaggctgccatgccggcaatgcccggcggcatgggcggaatgggt
ggcatgggcggcatgatgtaa
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