Geobacter metallireducens: Gmet_0089
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Entry
Gmet_0089 CDS
T00295
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gme
Geobacter metallireducens
Pathway
gme03420
Nucleotide excision repair
gme03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Gmet_0089 (pcrA)
03430 Mismatch repair
Gmet_0089 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gme03400
]
Gmet_0089 (pcrA)
Enzymes [BR:
gme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Gmet_0089 (pcrA)
DNA repair and recombination proteins [BR:
gme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Gmet_0089 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Gmet_0089 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_12
AAA_11
Zn_ribbon_Dof
Motif
Other DBs
NCBI-ProteinID:
ABB30338
UniProt:
Q39ZI6
LinkDB
All DBs
Position
complement(112218..114446)
Genome browser
AA seq
742 aa
AA seq
DB search
MDLLKNLNPPQKEAVLHGEGPLLVLAGAGSGKTRVIVHRIAHLICNLGVPPWQILAVTFT
NKAAGEMRERVERLVGAGEAPLIATFHSTCARFLRRDIHHLGYDSSFAIYDDKDAEKLLK
EVIAGLGLDEKRFPARSFAAAIDDCKNRGIPPGEIPTGDYTGEMLARVYGAYQERLKKCN
ALDFGDLLMLTVRLLEEHPEVLARYRDKYRWILVDEYQDTNPIQYRLVRLLAGERRNLCV
VGDDDQSIYRWRGADIRNILDFEKDFPGVVTVKLEQNYRSTQNILAAAGAVVAKNRGRKA
KTLWSENPAGEAIVYRRLSDEREEARFVCREVEKHVRRGGDLRDVAVFYRTNAQSRVIED
AMVADGIPYHMVGGMRFYERMEVKDILAYLKVLVNPADEVSLKRIINVPARGIGHATVDK
VAELAFRKGIILYDAFSEASTSGLLSTGPRGKIAGFMALMEQFAGLAGTVPLSELASRII
DGTGYAAKLKEERSDEAQDRLDNLQELCSAMEEFERTSDEKTLAAFLEQVALVSDLERGE
GKRESATLMTLHAAKGLEFPVVFMIGMEEKLFPHVRSLDDPEAMEEERRLCYVGMTRARE
RLILTNARRRRLFGQDQVNMSSRFIADVPRDLLDLEDEYQSSFGFGAGRGLERETTAAEP
TRHNLASIFETEIEPDFDDIEVIPDEPEDGGIWLGMKVRHGKFGVGVIRKIEGKGDDQKV
IVWFNSVGPKKLLVRFAGLERV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggaccttctgaaaaatctcaacccgccccagaaggaggcggttctccacggcgagggg
ccgctcctggttctggccggagccggatccggcaagacccgggtcatcgtccaccgtatc
gctcacctgatctgcaacctcggcgtccccccgtggcagattctggcggttaccttcacc
aacaaggccgccggcgagatgcgggagcgggtggagcggctcgtgggagccggcgaggct
cccctcatcgccaccttccactccacctgcgcccggttcctgcgccgcgatatccaccac
ctggggtatgactcctccttcgctatctacgacgacaaggacgcggaaaagcttctgaag
gaggtgatcgccggcctcggcctggacgagaaacgcttcccggcccgctcctttgccgcc
gccatcgacgactgcaagaaccggggcatcccccccggggagatccccaccggcgactac
accggcgagatgctggcccgggtctacggcgcctaccaggagcggctgaagaagtgcaac
gccctggacttcggcgatctcctcatgctgacggtccgtctcttagaagagcaccccgag
gtgctggcccgctaccgggacaaatatcgctggatccttgtggacgagtatcaggatacg
aacccgattcagtaccggctcgtgcggcttctggccggggagcggcgcaacctctgcgtg
gtgggggacgatgaccagtcaatctatcggtggcggggggccgacatccggaacatcctc
gacttcgagaaggattttcccggcgtggtcacagttaagctggagcagaactaccgttcc
acccaaaacatcctggccgcggccggggccgtggtggccaaaaaccgcggccgcaaggcc
aagaccctctggagcgagaacccggccggcgaggccattgtctaccggcgcctctccgac
gagcgggaggaggcccgcttcgtctgccgggaggtggagaagcatgtgcggcgcggcggg
gatctgcgggacgtggcggtcttctaccggaccaacgcccagtcccgggtcatcgaggac
gccatggtggccgacgggattccctaccacatggtgggggggatgcggttctacgagcgg
atggaggtaaaggacatcctcgcctacctgaaggtcctcgtgaaccccgccgacgaggtg
tccctcaagcggatcatcaacgtcccggcccggggtatcggccacgccaccgtggacaag
gtggcggagctggcattccgcaaggggatcattctctacgacgccttcagcgaggcgtcc
accagcggactcctctccaccggcccccgggggaaaatcgccggcttcatggcactcatg
gagcagtttgccggcctcgccggcacggtacccctgtcggagctcgcctcccgcatcatc
gacgggaccggctacgccgccaaactgaaggaagagcggagcgacgaggcccaggaccgc
ctcgacaacctccaggaactctgttccgccatggaggagttcgagcgaacgagcgacgag
aagaccctggccgccttcctggagcaggtggccctcgtgtcggatctggagcggggcgag
gggaagcgggaatcggccaccctcatgaccctccacgcggccaaggggctcgaattccca
gtggtattcatgatcggaatggaggagaagcttttcccacacgtccgctccctggacgac
cccgaggccatggaggaggagcggcgcctctgctacgtggggatgacccgggcgagggag
cggctgatcctcaccaacgcccgccgccggcgactcttcggccaggaccaggtgaacatg
tcgtcccgcttcatcgccgacgttccccgggatctcctggatctggaagacgagtaccag
tcctccttcggcttcggcgcaggacgggggctggagcgggagacaacagccgccgaaccg
acgcgccacaacctggcgagcatcttcgaaacggagatcgagcccgatttcgacgacatc
gaggtgatccccgacgagcccgaggacggcggcatctggctcggcatgaaggtgcgccac
ggcaagttcggcgtcggcgtcatccgcaagatcgaggggaagggggacgaccagaaggtg
atcgtctggttcaactccgtggggccgaagaagctgttggtgcggtttgcagggttggag
cgggtttga
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integrated database retrieval system
