Geobacter metallireducens: Gmet_0219
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Entry
Gmet_0219 CDS
T00295
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gme
Geobacter metallireducens
Pathway
gme00300
Lysine biosynthesis
gme00470
D-Amino acid metabolism
gme01100
Metabolic pathways
gme01110
Biosynthesis of secondary metabolites
gme01120
Microbial metabolism in diverse environments
gme01230
Biosynthesis of amino acids
Module
gme_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Gmet_0219 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Gmet_0219 (lysA)
Enzymes [BR:
gme01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Gmet_0219 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ribosomal_L21e
Motif
Other DBs
NCBI-ProteinID:
ABB30465
UniProt:
Q39Z59
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All DBs
Position
complement(250957..252276)
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AA seq
439 aa
AA seq
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MTMTSFGPTGLDATLIPKIAGEWGTPIYLHDQQYIENSCDQLLAMPNAYGLHVRYAIKAN
SDRTVLRIVTGKGLDLDCSSLDEAARAHAAGIPYSRMMLTTQEVPTGEERTELEAMIKVG
LKYNVCSTLQYQLIADFAAQNKIDLSMRVHPGAAGGGESATRDTGSEYSCFGVHLRDVPT
VKALADEKGLRFTQVHVHIGSGGAPEKWQENIDRELGFIKTYFPDAVTVSFGGGLKVARM
PGEKQADIATLGAYAKQRIEEFKAATGRELMMEIEPGTFVVANSGHIVTRIIDKKFTNEM
NFLIVDGGMELLTRPLLYGSEHPIAIVRQDGTLLSSEYDQTPTAGLKPFGIVGRCCESGD
SVRLDKEGNIVPVMIVEPEIGDYVVIGGTGAYSESMSPENYNSHRKPGAVMRTKTGELVL
IRKKQVREQLTQNELDVTL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgacttcttttggtccgaccggactcgacgcaacgcttatcccgaagatcgcc
ggggaatggggaacccctatttacctccacgatcagcagtacatcgagaacagctgcgac
cagctgcttgccatgcccaatgcctacggcctgcacgtccgctacgccatcaaggccaac
tctgaccgcaccgtcctgcgcattgtcaccggcaaggggctggacctggactgctcatcc
ctggacgaggccgcccgggcccatgccgccggcatcccctacagccgcatgatgctcacc
acccaggaggtccccaccggcgaggagcggaccgaactggaagccatgatcaaggtcggc
ctcaagtacaatgtctgctccacgctgcagtaccagctcatcgccgactttgccgcccag
aacaagatcgacctttccatgagggtccatccgggcgccgccggcggcggcgagagcgcc
acccgcgacaccggcagcgagtactcctgcttcggcgtccacctgcgcgacgtcccgacc
gtgaaggccctggccgacgagaaagggctccgcttcacccaggtccacgtccatatcggc
tccggcggcgccccggagaagtggcaagagaacatcgaccgggagctcggcttcatcaaa
acctacttcccggatgcagtcaccgtcagcttcggcggcggcctcaaggtggcccgcatg
ccgggcgagaagcaggccgacatcgccaccctgggagcctatgcaaagcagcggatcgaa
gagttcaaggccgccaccggccgcgaactgatgatggagatcgagccggggacctttgtg
gtggccaactcggggcacatcgtcactcgcatcatcgacaagaagttcaccaacgagatg
aacttcctcatcgtcgacggcggcatggagctactgacccggccgctcctctacggctcc
gagcatcccatcgccatcgtccgccaggacgggacgctcctctccagcgagtacgaccag
acccccacggcggggctgaagcccttcggcatcgtcggccgctgctgcgaaagcggcgac
tcggtccgcctggacaaggaggggaacatcgtgccggtcatgatcgttgagccggagatc
ggcgactacgtcgtcatcggcggcaccggcgcctactccgagagcatgtcgccggagaac
tacaactcccaccgcaagccgggagccgtcatgaggaccaaaaccggcgaactggtgctc
atccggaagaagcaggtacgggagcaactgacccagaacgaactggacgtgacgctgtaa
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