Geobacter metallireducens: Gmet_0308
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Entry
Gmet_0308 CDS
T00295
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase/fumarate reductase, type E, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
gme
Geobacter metallireducens
Pathway
gme00020
Citrate cycle (TCA cycle)
gme00190
Oxidative phosphorylation
gme00650
Butanoate metabolism
gme00720
Other carbon fixation pathways
gme01100
Metabolic pathways
gme01110
Biosynthesis of secondary metabolites
gme01120
Microbial metabolism in diverse environments
gme01200
Carbon metabolism
Module
gme_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gme_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Gmet_0308 (sdhA)
00650 Butanoate metabolism
Gmet_0308 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
Gmet_0308 (sdhA)
00720 Other carbon fixation pathways
Gmet_0308 (sdhA)
Enzymes [BR:
gme01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Gmet_0308 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Pyr_redox_2
FAD_oxidored
GIDA
Thi4
Motif
Other DBs
NCBI-ProteinID:
ABB30553
UniProt:
Q39YX1
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All DBs
Position
347521..349224
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AA seq
567 aa
AA seq
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MEHKFDIVIVGAGGGGLFAALEAVRTNPRVSVAVISKVYPTRSHTSAAQGGVNAALGNKD
RDDTVDLHVFDTVKGSDYLADQDAVDYLCSQAPSVVRELENLGAPFSRFADGTIAQRPFG
GTVKDRCCYCADKTGHTLLHTLFEQCLRRGVTFFNEYFLLSLEHADGDCQGVITLNMATS
AIETFVAPVVILATGGHAKMYWNRSSNAAGNTGDGQAAALRAGIPLKDMEFIQFHPTGLR
KSGLLVTEGARGEGGYLLNRHGERFMVRYAPQKMELGPRDLVARSMETEIIEGNGFESDA
GSYIELDLRHLGAEAIKKKLPQIRELSMHFEGVDPIAEPIPVRPTAHYSMGGIDAHMAKT
AVRGVFAVGECACVSVHGANRLGGNSLLDILVFGKRAGQEAAEEAPRRRALGIPPGAVAG
MADEIRSYANPERYERYGIIREEMGKAMGDNVGIYRVEERLRTGVEEILALRERFRRIRL
FDTGTVYNTNLIQILELKNMLDLASCVAITALARQESRGSHYREDFPRRDDGAWHIHSLC
TMERDGEVRLGHKPVTMGKYSLETRSY
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggagcacaaattcgacatagtcatcgtcggggcagggggaggagggctgttcgccgcc
ctggaggcggtgcgcaccaacccgcgggtttccgtggccgtcatctccaaggtctacccg
acccgctcccatacctccgcggcccaggggggggtcaacgcggccctggggaacaaggac
cgggacgacaccgtggatctccatgtcttcgacaccgtcaaggggagcgactacctggcg
gaccaggatgccgtcgactacctctgcagccaggccccgtcggtggtgcgggagctggag
aacctgggggcgccgttttcgcgattcgctgatggcaccatcgcccagcgccccttcggc
gggaccgtgaaggaccgctgctgctactgcgccgacaagaccggccataccctcctccac
accctgttcgagcagtgcctccgccggggggtgacgttcttcaacgaatatttcctcctc
tccctggagcatgccgacggcgactgccagggggtcatcaccctgaacatggccacgagc
gccatcgagacctttgtggccccggtggtcatcctggccaccggcggccacgccaagatg
tactggaaccgctccagcaacgcggccggcaacaccggtgacggccaggccgcggccctg
cgggccggcattcccctgaaggacatggagttcatccagttccacccgacgggcctgcgc
aagagcgggctcctggtgacggaaggggcgaggggcgagggggggtatctcctcaaccgc
cacggggagcgcttcatggtccgctatgccccccagaagatggagctgggtccccgggac
ctggtggcccgctccatggagacggagatcatcgaggggaacggcttcgagagcgatgcc
gggagctacatcgaactggatctccgccacctgggtgccgaggccatcaagaagaagctc
ccccagatcagggaactctccatgcacttcgagggggtggaccccatcgcggagccgatc
ccggtccgtcccacggcccactactccatgggggggatcgacgcccacatggcgaagacc
gcggtccgcggcgtctttgccgtgggggagtgcgcctgcgtctccgtgcacggggccaac
cggctggggggaaactcgctcctggacatcctggtgttcgggaaacgagcgggacaggag
gcggccgaggaggccccccggcgcagggcgctggggatacccccgggcgcggttgcgggg
atggccgacgaaatcaggtcgtacgccaatcctgagcgctacgagcgttacggcatcatc
agggaggagatgggaaaggccatgggggacaacgtggggatctatcgggtcgaagagagg
ctccgcacgggggtggaagagatcctggccctgcgggagcgcttccggcgcatccggctc
ttcgacacggggaccgtctacaacaccaacctgattcagatcctggagctcaagaacatg
ctcgacctggcctcctgcgtcgccatcaccgccctggcccggcaggagagcagggggtcc
cattaccgcgaggacttcccccggcgtgacgacggagcgtggcacatccattccctctgc
accatggagcgggatggcgaggtccgtctcggccacaagccggtcaccatggggaaatac
tccctcgagacaaggagttactaa
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