Geobacter metallireducens: Gmet_1283
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Entry
Gmet_1283 CDS
T00295
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
gme
Geobacter metallireducens
Pathway
gme02020
Two-component system
gme02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Gmet_1283 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Gmet_1283 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gme03021
]
Gmet_1283 (rpoN)
Transcription machinery [BR:
gme03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Gmet_1283 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4_2
HTH_3
DUF5812
Motif
Other DBs
NCBI-ProteinID:
ABB31519
UniProt:
Q39W55
LinkDB
All DBs
Position
1443385..1444836
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AA seq
483 aa
AA seq
DB search
MAIEMRQQMKLTQQLVMTPQLQQAIKLLQLSRLELQDLVRQEMEENPVLEETLELEEPKE
QDQLEQSEKEETPSGEDNKEFQEVKAGEETLRETDWDSYLEGYNFSAGEQYYDDEDRPSY
ENVLTRKGTLGDHLMWQLSLTRFSDVETAVGAEIIGNIDEDGYFRATVEEIARSQGVDEA
LVETCLKKVQEFDPMGVGARDLRECLLIQVEQLGMGGSVVEGILRHHLHDLEARKYKQIA
KALGVDINDVLMGARIIAGFDPKPGRVYGSEDVHYISADIFVYKIGEDYVVVLNDEGLPN
LRISPYYAGEAKASGQVDAKAEEYINDKVRSAMWLIKSIHQRQRTIYKVAKSISKFQRDF
LDKGIEYLRPLVLRDVAEDIGMHESTISRVTTNKYMQTPQGLFEMKYFFNSGISTGEGDF
IASESVKNKIKEIVEAEDPRKPYSDQRIADLLSAHSINIARRTVTKYREMLRIGSSSERK
RHF
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggccattgaaatgcgtcaacagatgaagctgacccagcaactggtgatgactccccag
ttgcagcaggccatcaagcttctccagctctcacggcttgagcttcaggatcttgtccgt
caggaaatggaggagaatccggtccttgaggaaaccctcgaactggaggaacccaaagag
caggaccagttggagcagtccgaaaaggaagagacaccttctggtgaggacaacaaggag
ttccaggaggtgaaagcgggcgaggaaacgctgcgcgaaaccgactgggacagctatctc
gaaggttataatttcagcgcgggcgagcagtattacgacgacgaagatcgcccctcctac
gaaaatgtcctgacccgcaagggcacgctcggtgatcacctcatgtggcagttgagcctc
acccggttttctgacgtggagacggcggtgggtgccgagattataggcaatatcgatgaa
gacggctatttccgtgccacagtggaggaaattgcgcgatcgcagggcgttgacgaagcc
cttgtcgagacatgtctcaaaaaggttcaggaattcgaccccatgggggttggtgcgcgg
gacctcagggagtgcctccttattcaggtggaacagcttggaatggggggaagcgtcgtg
gaggggatcctgcgtcatcacctccacgatcttgaagcccgcaaatacaagcagattgcc
aaggccctcggggtcgacatcaacgatgtcctcatgggggcgcggatcattgccgggttt
gatcccaagccggggcgggtctatggctccgaggacgtccactatatttccgccgacatt
ttcgtttacaagatcggagaggattacgtggtggtgctgaacgacgagggactccccaac
ctccggatcagcccctactacgcgggagaagccaaggcgagcggccaggttgatgccaag
gccgaggaatacatcaacgacaaggtccgttcggccatgtggctcattaagagtattcac
cagcggcagcggaccatttacaaagtggccaagagcatctccaagttccagcgcgatttt
ctcgacaaggggattgaatatcttcgccccctggtgctccgcgatgtggccgaggatatc
ggcatgcacgagtcgaccatcagccgcgtcaccaccaacaagtacatgcagaccccccag
gggctcttcgaaatgaagtatttcttcaacagcggcatttccacgggagagggtgatttc
atcgcctccgagagtgtcaagaacaagatcaaggaaatcgtcgaggccgaggatccccgt
aagccttacagcgaccagcgtatcgccgatcttctgtcggcccacagcattaacatcgcc
cggcgcacggtcaccaagtaccgtgagatgctgagaataggatcgtcttcggagcgcaag
cggcatttctga
DBGET
integrated database retrieval system
