Geobacter metallireducens: Gmet_1397
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Entry
Gmet_1397 CDS
T00295
Symbol
pilR
Name
(GenBank) sigma-54-dependent transcriptional response regulator PilR
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
gme
Geobacter metallireducens
Pathway
gme02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Gmet_1397 (pilR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
gme02022
]
Gmet_1397 (pilR)
02035 Bacterial motility proteins [BR:
gme02035
]
Gmet_1397 (pilR)
Two-component system [BR:
gme02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
Gmet_1397 (pilR)
Bacterial motility proteins [BR:
gme02035
]
Pilus system
Twitching motility proteins
Gmet_1397 (pilR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
AAA
Mg_chelatase
AAA_2
bpMoxR
IstB_IS21
HTH_50
HTH_30
PDE8A_N
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ABB31631
UniProt:
Q39VU3
LinkDB
All DBs
Position
1565515..1566891
Genome browser
AA seq
458 aa
AA seq
DB search
MEIRILVVDDELSMREFLAILLKREGYAVDQADCAEKALEFLDSITYDLVISDVKMPGLD
GIALLGRIKENSPDTAVLMMTAFSTAEQAVEAMKLGAYDYIAKPFKVEEVKVLVRNALEK
RDLKRENQRLRQEVQERYGFSGLIGKSKKMRELYSLIERVAPSIANVLILGESGTGKELV
ARAIHYNSPRKDKAFVAVNCGAIPETLMESELFGHKKGSFTGAINDRAGLFEQAGGGTLF
LDEIGEVPLQLQAKLLRVLQEKEFRRVGGVADQKADVRIVAASNRNLEEQVREGSFREDL
FYRLNVVQLQMPPLRERTEDIPLLVEHFYRKYVQSNRNGEIITPGALKILMSYPFPGNVR
ELENLVERCMVLGGGTISEESLPPQVRGSQKSATAPVGDFEIPSEGMDLEGYLDGIEKRI
LLQALERCGGVKKKAAELLGLTFRSFRYRLAKFGMDEE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaaatacgaatactggttgtcgatgacgagttgagcatgcgggaattcctcgccatt
ctcctcaaacgcgaggggtacgcggtggatcaggccgattgcgcggaaaaggccctggag
ttccttgactcaattacctacgatctggtcatttccgatgtgaaaatgcccggtctggac
ggcattgccctgctggggcggatcaaggaaaactctcccgacaccgcggtcctcatgatg
accgccttctccaccgccgagcaggccgtggaggccatgaagctgggggcctacgactac
atcgccaagcccttcaaggtggaggaggtgaaggtcctcgtccgtaacgcccttgagaag
cgggacctgaagcgggaaaaccagcgtctgcgccaggaggtccaggagcggtacggcttc
agcggcttgatcggcaagagcaagaagatgcgggaactctactccctcatcgagcgggtg
gcccccagcatcgccaacgtcctgattctgggtgagagtggcaccggcaaggaactggtg
gcacgggccatccactacaacagcccccgcaaggacaaggccttcgtggcggtgaactgc
ggcgccattcccgaaacactcatggagagcgaactcttcggccacaagaagggctccttc
accggcgccatcaacgaccgggccggcctcttcgagcaggccggcggcggcaccctcttc
ctcgacgagatcggcgaagtgccgctccaacttcaggcaaagctcctgcgggtcctccag
gaaaaggagttcaggcgggtagggggagtagccgaccagaaggccgacgtgcggatcgtt
gccgcctccaaccgcaacctggaagagcaggtgcgggaaggctccttccgggaagacctc
ttctaccggctgaacgtggtccagctccagatgcctcccctgcgggagcggacagaagac
atccccctgctggtggagcatttttaccgcaagtacgttcagtccaaccgcaacggagag
attatcacccctggcgccctgaagattctcatgtcatatccgtttccgggaaatgtgcgc
gaactggagaacctggtggaacggtgcatggttcttggcggggggaccatttccgaggag
agccttccgccccaggtccgggggagccagaagtccgcgacggccccggtcggtgatttc
gagattccttccgaagggatggacctggaagggtacctggacggcatcgagaagaggatc
ctcctccaggccctggagcggtgcggcggggtcaagaagaaagcagccgagcttctgggg
ctcacgttccggtcattccgctaccgtctggccaagttcgggatggatgaggaatga
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