KEGG   Geobacter metallireducens: Gmet_1896
Entry
Gmet_1896         CDS       T00295                                 
Symbol
lpdA-2
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
gme  Geobacter metallireducens
Pathway
gme00010  Glycolysis / Gluconeogenesis
gme00020  Citrate cycle (TCA cycle)
gme00260  Glycine, serine and threonine metabolism
gme00280  Valine, leucine and isoleucine degradation
gme00310  Lysine degradation
gme00380  Tryptophan metabolism
gme00620  Pyruvate metabolism
gme00630  Glyoxylate and dicarboxylate metabolism
gme00640  Propanoate metabolism
gme00670  One carbon pool by folate
gme00785  Lipoic acid metabolism
gme01100  Metabolic pathways
gme01110  Biosynthesis of secondary metabolites
gme01120  Microbial metabolism in diverse environments
gme01200  Carbon metabolism
gme01210  2-Oxocarboxylic acid metabolism
gme01240  Biosynthesis of cofactors
Module
gme_M00009  Citrate cycle (TCA cycle, Krebs cycle)
gme_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gme_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
gme_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:gme00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    Gmet_1896 (lpdA-2)
   00020 Citrate cycle (TCA cycle)
    Gmet_1896 (lpdA-2)
   00620 Pyruvate metabolism
    Gmet_1896 (lpdA-2)
   00630 Glyoxylate and dicarboxylate metabolism
    Gmet_1896 (lpdA-2)
   00640 Propanoate metabolism
    Gmet_1896 (lpdA-2)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Gmet_1896 (lpdA-2)
   00280 Valine, leucine and isoleucine degradation
    Gmet_1896 (lpdA-2)
   00310 Lysine degradation
    Gmet_1896 (lpdA-2)
   00380 Tryptophan metabolism
    Gmet_1896 (lpdA-2)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    Gmet_1896 (lpdA-2)
   00670 One carbon pool by folate
    Gmet_1896 (lpdA-2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gme04147]
    Gmet_1896 (lpdA-2)
Enzymes [BR:gme01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     Gmet_1896 (lpdA-2)
Exosome [BR:gme04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   Gmet_1896 (lpdA-2)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_3 GIDA DAO HI0933_like FAD_binding_2 Thi4 NAD_binding_8 Lys_Orn_oxgnase 2-Hacid_dh_C 3HCDH_N
Other DBs
NCBI-ProteinID: ABB32125
UniProt: Q39UE9
LinkDB
Position
2116956..2118314
AA seq 452 aa
MKSFDVVIIGGGPGGINAGIMLSKAGKNVALIQEEAVSFGGTCLNSGCMPTKSLLKAATA
YRYAKQAERYGLDLQAGPVDLGKLCAVTETDLNMLRGAIKGMLAETSITAFRGNGSFASE
HEVTVTMAGGEQETIWGETIIIATGSSPRELPSAPFDGLHILSSDQMLTNTDLPKKLLIV
GGGAIGCEFATLYKTFGSEVVLIEAMETLLPREDRDAGKKLQAAFEAQGITVRTGTSIDR
LIVVDEKIRIQFDNGDSIDSIDKVLVGIGRAPNIEGLNLEAAGLRTEHGAVKVNELMQTN
VPHIYAIGDVTGGLTLAHAAQREAQLLVQNLLHGSSHALKELAVPRVAFSYPEVAAVGAS
QEGNGIRAYTLPQVPNGRSVVDKVAPAFVKLFLKEQTSEIAGAVIIGEAATEIIHEMALA
VENGLTLQQVGNTVHVHPTHSKNILYAIQSCG
NT seq 1359 nt   +upstreamnt  +downstreamnt
gtgaaaagctttgatgtggtcattatcggcggtggccctggcggaatcaatgcgggaata
atgctcagcaaggcgggcaaaaatgttgccctgattcaggaagaggcggtctctttcggc
ggcacctgcctgaatagcggctgtatgccgacaaagtcgctgttaaaggccgcgacggct
taccggtacgccaaacaggcagaaagatatggtttggacctgcaggcgggacccgtcgat
ttagggaaactgtgcgccgttactgaaacagatctcaacatgctgcgtggggcgatcaag
ggaatgctcgcggaaacctcgattacggcattccgtgggaacggctctttcgcgtcggag
catgaagtcacggtcaccatggccggtggcgagcaggagacgatctggggcgaaacgatc
attattgcaacgggttcgagcccccgggaactcccctcggcgcccttcgacggtttgcac
atcctttcgagcgaccagatgctgaccaacaccgacctgccgaaaaaactcctgatcgtc
ggtggaggtgcgatcggatgtgagttcgccaccttgtataaaacgtttggcagcgaggtc
gtactcatcgaggcgatggaaacccttctgccgcgcgaagaccgcgacgccggcaaaaaa
ctgcaggcagcctttgaagctcaagggattaccgtcaggaccggcacgtcgatcgaccgg
ctcatcgtagtagatgaaaaaatcaggatacaatttgacaatggcgacagcatcgatagc
atcgacaaggttctggtcggaatcggcagggctcccaacatcgaggggctgaacctggaa
gcggccggcctgcgaactgagcatggcgccgtcaaggtgaatgaattaatgcaaaccaat
gtgccgcacatctacgccatcggagacgtgaccggtgggctgacgctggcccatgcggca
caaagggaggcgcaactgctggtccaaaatctgctgcatgggagcagccatgctctcaaa
gaactggctgtcccccgggtggctttcagctatccggaggtggcagcagtgggggcatcc
caggaaggaaacggcatcagggcctacaccttaccccaggttcccaatggacgttcagtg
gtggacaaggttgccccggccttcgtgaagctttttttgaaggagcaaacctctgaaatc
gccggagcggtaatcatcggagaggcggcgacagaaatcatacacgagatggcattggcg
gtggagaacggccttaccctgcaacaggtgggtaatacggttcatgtccacccgacccat
tctaaaaacatcctctatgcgatacaaagctgcggttaa

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