Geobacter metallireducens: Gmet_1935
Help
Entry
Gmet_1935 CDS
T00295
Name
(GenBank) trans-isoprenyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
gme
Geobacter metallireducens
Pathway
gme00900
Terpenoid backbone biosynthesis
gme01100
Metabolic pathways
gme01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Gmet_1935
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gme01006
]
Gmet_1935
Enzymes [BR:
gme01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Gmet_1935
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Gmet_1935
2.5.1.29 geranylgeranyl diphosphate synthase
Gmet_1935
Prenyltransferases [BR:
gme01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Gmet_1935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
TrbL_3
Motif
Other DBs
NCBI-ProteinID:
ABB32164
UniProt:
Q39UB0
LinkDB
All DBs
Position
complement(2160839..2161732)
Genome browser
AA seq
297 aa
AA seq
DB search
MDLKNYLKERCAIVDEALERSLPGEGDLPVSVHRAMRYSVFAGGKRIRPVLMLAACEAVG
GTPDLALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLTE
AFILMSSPEYAAKAGHARILPVIHEIGICAGSRGMVGGQVVDMESEGKKDIDLATVQYIH
THKTGALMKASVKAGAILGGAEGDALAAMTRYGEAIGLAFQIADDILDIEGTTEQIGKDA
GSDEARGKATYPAVMGLADSKRRAQELVDLALEALSPFGEKAEPLREIARYIVSRKS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggaccttaaaaactatctcaaagaacgctgtgccattgttgatgaagctcttgaacgc
tccctgcccggtgagggggaccttcccgtttccgttcatcgcgccatgcgctattcggtt
ttcgcaggggggaaacggattcggccggttctgatgctcgccgcctgtgaggcggtggga
ggaactccggacttggcgcttcccgctgcgtgcgccatggagatgatccacacctattcc
ctcatccacgacgatctccccgcaatggacgacgacgatttccgccgcggacgtcccaca
aaccacaaggttttcggcgaggcaatcgccatccttgccggtgatgcgctccttacggaa
gcgttcatcctcatgagctctcccgaatacgccgcaaaggccggacatgcccgtattctt
ccggttatccacgagattggcatctgtgccggttcccgggggatggtcggcggccaagta
gtcgacatggagagcgaggggaaaaaggatatcgatctggccacggtccagtacatacac
acccacaagaccggcgccctcatgaaggcttcggtcaaggcgggcgcaatactcggcgga
gcggaaggggacgcccttgcggccatgacccgttacggcgaggccatcggccttgcgttc
cagattgccgatgacatccttgacatcgagggtaccaccgagcagatcggcaaggatgcg
gggagcgacgaagcccgggggaaagccacctatccggcggtcatggggcttgccgattcc
aaacgccgcgcccaggagttggtggatctggccctcgaagccctttcccccttcggcgag
aaagcggaacccctgcgggagatcgcccgttacatcgtatcccggaaatcgtaa
DBGET
integrated database retrieval system
