Geobacter metallireducens: Gmet_1960
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Entry
Gmet_1960 CDS
T00295
Symbol
trpS
Name
(GenBank) tryptophanyl-tRNA synthetase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
gme
Geobacter metallireducens
Pathway
gme00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Gmet_1960 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gme01007
]
Gmet_1960 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gme03016
]
Gmet_1960 (trpS)
Enzymes [BR:
gme01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
Gmet_1960 (trpS)
Amino acid related enzymes [BR:
gme01007
]
Aminoacyl-tRNA synthetase
Class I (G)
Gmet_1960 (trpS)
Transfer RNA biogenesis [BR:
gme03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Gmet_1960 (trpS)
Prokaryotic type
Gmet_1960 (trpS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA-synt_1d
Motif
Other DBs
NCBI-ProteinID:
ABB32189
UniProt:
Q39U85
LinkDB
All DBs
Position
complement(2184903..2185889)
Genome browser
AA seq
328 aa
AA seq
DB search
MSNKRIVSGMRPTGKLHLGHFHGVLANWRELQEEYECFFFAADWHSLTTEYDNTAGIRQN
TDEMILDWLAFGVDPAKCVIFRQSRVPQHAELNLILSMITPVSWLERNPTYKEMQENLST
KDLSTFGFLGYPVLMASDIIVYKASKVPVGHDQLPHLEITREIARRFNYLYNREVFPEPA
ALLTETPKVLGLDGRKMSKSYGNAIFLSESAEETRKKVMSMVTDTQRVRRSDPGEPDRCV
AFSLNSLYLPEEKKADIYAGCRSAAIGCVECKKLQAEYLVQTLAPYRARRDELTEKPGLV
AEILAEGEARAATEAARTMAEVRDALNL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaagcggatagtcagcggcatgaggccaaccggaaaactccaccttggccac
ttccacggcgtgctcgccaactggcgggaactccaggaagagtatgaatgcttcttcttc
gctgccgactggcactcccttaccactgaatacgacaacaccgcaggtatacgtcagaac
accgacgagatgatcctcgactggcttgccttcggggtcgatcccgccaagtgcgttatc
ttccggcagagccgcgtaccccagcacgcggaactgaacctgatcctttccatgatcacg
ccggtttcatggcttgagcggaaccccacctacaaggagatgcaggagaatctttccacc
aaggatctctccaccttcggttttctcggctatccggtcctcatggcgtcggacatcatc
gtctacaaggcatccaaggttccggtggggcacgatcagctcccccacttggagattacc
cgcgagatcgcacggcgcttcaactacctctacaacagagaggtcttccctgagcccgcg
gcgctcctcaccgagacgcccaaggtgctggggctcgacggccgcaagatgagcaagtcc
tacggcaatgccatttttctctcggagagtgccgaagaaacccgcaagaaggtgatgtcg
atggttaccgatactcagcgggtccggcggagcgatccgggggagcccgaccgttgtgtt
gccttttccctcaacagcctctacctccccgaagaaaagaaggcagacatctacgcaggg
tgccgcagtgccgccattggttgcgttgagtgcaagaagctccaggccgagtacctggtc
cagacccttgccccctaccgggcacgccgcgacgaactcaccgaaaagccggggctcgtg
gccgaaatccttgccgaaggggaggcccgtgccgcaaccgaggccgcgcgaaccatggcc
gaggtgcgggacgccctcaatctatga
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