Geobacter metallireducens: Gmet_2019
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Entry
Gmet_2019 CDS
T00295
Name
(GenBank) decarboxylase, BtrK-related protein
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gme
Geobacter metallireducens
Pathway
gme00300
Lysine biosynthesis
gme00470
D-Amino acid metabolism
gme01100
Metabolic pathways
gme01110
Biosynthesis of secondary metabolites
gme01120
Microbial metabolism in diverse environments
gme01230
Biosynthesis of amino acids
Module
gme_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Gmet_2019
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Gmet_2019
Enzymes [BR:
gme01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Gmet_2019
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ABB32248
UniProt:
Q39U26
LinkDB
All DBs
Position
complement(2258867..2260126)
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AA seq
419 aa
AA seq
DB search
MILTEQNGKTCLRNICFEELAARYGTPFYLYDLDKVKEKCAAVRKAFGDSLELLYAVKAN
PNRELLAAMRGEVDGLDIASAGELERALETGYDAGCISFAGPGKTRDELRRSLEAGVGCI
SVESLRELNDLRDLVRAGSHRAYILVRVNPQLLIRDFAVKMGGKASQFGIDEEELPSALD
FIKANADAFDFKGIHIYAGTQCLNEEALAQNLANTLAIAARITTDYGMECRVINIGGGLG
VSYYEEHPGLDLDKLALLFRAEFDRYREATGTKPRILLELGRFLVAEAGIYVTRVVSEKL
SRGEQFYVLDGGMNHHLSASGNLGMTIRKNYLVRNLSRPGAERIICTLVGPLCTPLDLMG
KGVTVEVPEVGDLVGFLNSGSYGYSASPLLFLGHGEPCELLVEGKDVRPCRLMGEMGSR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgacggaacaaaacggcaaaacctgcctgcggaatatctgcttcgaggagctt
gccgcgcgctatggcacccccttctacctctacgacctggacaaggtgaaggagaagtgc
gctgccgtccgcaaggccttcggcgacagcctcgaactcctctacgccgtcaaggccaac
ccgaaccgggaactcctggcagccatgcggggcgaagtggacggcctcgacattgcctcg
gccggcgagctggagcgcgccctggagaccggctatgacgcggggtgcatcagcttcgcc
ggtccgggcaaaacccgcgacgagctgcgccgctccctggaggccggggttggctgcatc
agcgtcgaatcgctgcgcgagcttaatgacctgcgcgatctggttcgggccggttcgcat
cgggcttacattttggtgcgggtcaacccccagctcctcattagggacttcgcggtgaag
atgggtggtaaggcttcccagttcggtatcgacgaggaagaactgccatcggccctggac
ttcatcaaggccaatgccgatgcgtttgacttcaagggaatccacatctacgccggcacc
cagtgcctgaacgaggaagccctggcacagaatctcgccaacaccctggccatagcggcc
cggattaccaccgactacggcatggagtgccgggtcatcaacatcggcggtgggctcggg
gtctcctactacgaagagcatccggggctcgatctggacaagctggccctccttttcagg
gccgagttcgaccggtaccgcgaggccacggggacaaaaccccgcatcctcctggagctg
ggacggttcctggttgccgaggccggaatctacgtaactcgggtggtgagtgaaaagctg
tcgcggggcgagcagttctatgttctcgacggggggatgaaccaccacctgtcggcatcg
ggcaatctcggcatgaccattaggaagaactacttggtccgcaacctttcgcggcccggt
gcggaacggataatctgcacccttgtcggtcccctctgcaccccccttgatctgatgggg
aagggggtgacggtggaggtgccggaggtgggggatctggtcgggttcctgaattcgggg
agctatgggtacagtgcgagtccgctgctctttttggggcatggggagccgtgcgagctt
ttggttgaggggaaggacgtgcgtccctgccgattgatgggggaaatggggagtcgatga
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