Geobacter metallireducens: Gmet_2109
Help
Entry
Gmet_2109 CDS
T00295
Name
(GenBank) sigma-54-dependent sensor transcriptional regulator, PAS domain-containing
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
gme
Geobacter metallireducens
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gme03000
]
Gmet_2109
Transcription factors [BR:
gme03000
]
Prokaryotic type
Helix-turn-helix
Other families
Gmet_2109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
PAS_9
HTH_8
AAA_5
PAS
AAA_2
Mg_chelatase
PAS_4
AAA_22
PAS_8
AAA
AAA_16
DUF1919
AAA_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ABB32338
UniProt:
Q39TT6
LinkDB
All DBs
Position
2374764..2376185
Genome browser
AA seq
473 aa
AA seq
DB search
MADTEQHLEEMLRLANFTIERTGTPIVWVDSTTRFARVNDAACRCFGYSPDEFIRLTAQD
IAPGIPTELWPQHWAELKRMQFRTFSDHFRKRSGEKFPVEVEENFIRFEGREYSCSFIKD
MTQHFQTQEALRRALDEVQTLKNRLEAENVYLMNEIKLSNNFDEIVTGNPIFMKALQLVE
QVAPTDASVLILGETGVGKELIARAIHNLSNRRDRPLIRLNCAALPATLMENELFGHERG
AFTGANCRKPGRFDLADGGTLFLDEVGDLPMELQSKLLRVLQEGEFERLGGAETIKVDVR
ILAATHVDLKALLAEGRFRSDLYYRLNVFPIQCPPLRERREDIPLLVRHFVKASCEKNGK
SIELIPRHVMESLEGYPWPGNIRELQNVIERAVIISRGNKLEIDSLPKMVIAADAAPISP
LEVTEREHIIRALETTAWRVGGPKGAAEILGLKRTTLQARMRKLGINRQGLPA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacagagcagcatctggaagagatgcttcggctggcaaatttcaccatagag
cggaccggcacccccattgtctgggtggactccacgacccgttttgcacgggtaaacgac
gcggcatgccggtgtttcggttactcgcccgatgaattcatccgcctgactgcccaggac
atcgccccggggatccccacggaattgtggccgcagcactgggcagagctgaagcggatg
caattccgcaccttttcggatcatttcagaaaacgctccggggaaaagttcccggtagag
gtcgaggaaaacttcatccggttcgaagggagggaatactcctgcagcttcatcaaggac
atgacccagcatttccagacccaggaagccctgaggcgggccttggacgaggtgcaaacg
ctcaaaaaccgtctggaagccgaaaacgtgtacctgatgaacgagatcaaactctccaac
aacttcgatgaaatagtcaccggcaatcccatcttcatgaaggccctgcagcttgtggaa
caggttgcccccaccgatgcgtccgtacttatcctcggagaaacaggcgtcggcaaggaa
ctcatcgcccgcgccatccataacctgagcaaccgccgtgatcgccccctcatccggctc
aattgcgccgcattgccggcaactctcatggaaaacgaacttttcggccacgaaagggga
gccttcacgggagcgaactgccgcaaacccggcaggttcgacctggctgacggggggacc
ctttttctcgacgaggtgggtgatctgcccatggagttgcagagcaagcttctgcgtgtc
ttgcaggaaggggaattcgagcggctcggcggcgctgaaacgataaaggtcgatgtacgc
atcctggccgcgacccacgtggatttgaaagccctgcttgccgaggggcggtttcgcagc
gacctgtactatcgcctcaatgtctttccgatccaatgcccccccctcagggaacgcagg
gaagacatccccctgctggtcaggcattttgtcaaagcctcctgcgaaaagaacggaaaa
agcatcgagcttattccgcgccatgtcatggagtcactggaggggtacccctggcccggc
aatatccgggaactgcagaacgttatcgaacgggcggtgatcatcagccggggaaacaag
ctggagatcgactccctccctaaaatggtcatagccgccgatgcagcccccatctcacct
ctggaagtgaccgaacgggaacatatcatccgtgctctcgaaacaacggcatggcgagtc
ggcgggccaaagggcgccgctgaaatcctcggactgaaacgcacaaccctccaggcgagg
atgcgcaagctcggcatcaaccggcagggcctgccagcctga
DBGET
integrated database retrieval system
