Geobacter metallireducens: Gmet_2298
Help
Entry
Gmet_2298 CDS
T00295
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
gme
Geobacter metallireducens
Pathway
gme03030
DNA replication
gme03430
Mismatch repair
gme03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Gmet_2298 (holA)
03430 Mismatch repair
Gmet_2298 (holA)
03440 Homologous recombination
Gmet_2298 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gme03032
]
Gmet_2298 (holA)
03400 DNA repair and recombination proteins [BR:
gme03400
]
Gmet_2298 (holA)
Enzymes [BR:
gme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Gmet_2298 (holA)
DNA replication proteins [BR:
gme03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Gmet_2298 (holA)
DNA repair and recombination proteins [BR:
gme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Gmet_2298 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
DNA_pol3_gamma3
DUF8645
Phage_T4_Y01E
FAM165
Motif
Other DBs
NCBI-ProteinID:
ABB32523
UniProt:
Q39TA1
LinkDB
All DBs
Position
complement(2604542..2605546)
Genome browser
AA seq
334 aa
AA seq
DB search
MKIDEFNKALDRGEISPLYYFHGDEPHLMERAVKRLMDSAVPPDFRDFNLDVFYGNECKG
DEVASVAQTLPMFADRRMVLVKRAGDLSAAALEILASCVADPPPTTCLVFMGEKVDQRKK
FFQEMKKKGELVECKRPYENQLGAFIREEAKGLGKRVEPAAAEMLVYLVGNNLGELSTQL
EKVALYVGQRETISVEDVRGIVSDTKVESVFDLTNALGERNVVKALRSLATILRDGEAPL
MLLAMIARHFRQLWRVRDLMAQKVPQQDISRLAGINPYFIKGVMAQARNFSASELKKVFE
GLYATDLALKGGGAKRPTLTLEKLVMDVCGMGSR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgacgaattcaataaagccttggaccggggagagatttctcccctttattat
ttccatggggacgagccgcacctcatggaacgggccgtgaagcggctcatggatagtgct
gtcccccccgatttccgcgatttcaatctggatgtcttctacggcaacgagtgcaagggg
gacgaggttgcctcggttgcccagacgctccccatgttcgccgatcgacggatggtcctc
gtgaagcgggccggagatctctccgctgccgccctggagattctcgcctcctgtgtcgcc
gaccctccgccaaccacctgtctcgtcttcatgggggagaaggtggaccagcggaagaag
tttttccaggagatgaagaagaagggggagcttgtggagtgcaagcgcccctatgagaat
cagcttggcgccttcatccgtgaggaggcaaaggggctcggcaagcgggtcgaaccggcg
gcggccgagatgctggtctatctggtggggaacaacctgggcgaactctccacccagttg
gaaaaagtagccctgtacgtggggcagcgtgagacgatctctgtggaggatgtgcgggga
attgtctccgacacgaaggtggagagtgttttcgatcttacgaatgccctcggggagcga
aacgtggtaaaggcgctccgaagcctggccaccatactcagggacggggaggcgccgctt
atgcttctagccatgatcgcgcggcactttcggcagctctggcgagtgcgtgatctgatg
gcgcagaaagtcccccagcaggacatttcccgccttgccgggatcaatccctacttcatc
aagggagtcatggcacaggcgcggaacttttccgcctcagaattgaaaaaagtttttgag
ggcctctatgctaccgaccttgccttgaaggggggaggggcgaaacggccgaccctgact
ttggaaaagcttgtgatggacgtctgtgggatgggctcccggtag
DBGET
integrated database retrieval system
